Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13785

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,973,287	+		RR42_RS13775	0.89	-1.5
2,973,288	-		RR42_RS13775	0.89	+0.5
2,973,314	+				-1.3
2,973,314	+				-1.0
2,973,430	-				+1.6
2,973,430	-				-1.1
2,973,465	+		RR42_RS13780	0.10	+1.1
2,973,465	+		RR42_RS13780	0.10	-0.9
2,973,591	+		RR42_RS13780	0.24	+0.3
2,973,591	+		RR42_RS13780	0.24	+1.0
2,973,667	-		RR42_RS13780	0.33	-0.2
2,973,717	+		RR42_RS13780	0.38	+0.0
2,973,717	+		RR42_RS13780	0.38	-0.2
2,973,717	+		RR42_RS13780	0.38	-1.3
2,973,717	+		RR42_RS13780	0.38	+0.1
2,973,717	+		RR42_RS13780	0.38	+2.8
2,973,748	-		RR42_RS13780	0.42	-1.3
2,973,832	-		RR42_RS13780	0.51	-0.1
2,973,837	+		RR42_RS13780	0.52	-0.3
2,974,161	+		RR42_RS13780	0.88	-1.6
2,974,161	+		RR42_RS13780	0.88	-1.1
2,974,289	+				-1.3
2,974,290	-				-1.3
2,974,292	+				-1.8
2,974,300	-				+0.5
2,974,300	-				-0.6
2,974,300	-				-1.2
2,974,578	+		RR42_RS13785	0.28	+0.5
2,974,578	+		RR42_RS13785	0.28	-0.5
2,974,579	-		RR42_RS13785	0.28	+0.0
2,974,579	-		RR42_RS13785	0.28	+0.1
2,974,580	+		RR42_RS13785	0.29	+1.9
2,974,671	+		RR42_RS13785	0.37	+2.0
2,974,671	+		RR42_RS13785	0.37	+1.0
2,974,671	+		RR42_RS13785	0.37	+0.4
2,974,758	+		RR42_RS13785	0.45	-0.7
2,974,758	+		RR42_RS13785	0.45	+0.2
2,974,759	-		RR42_RS13785	0.45	+0.9
2,974,759	-		RR42_RS13785	0.45	-1.8
2,974,759	-		RR42_RS13785	0.45	-1.3
2,974,787	+		RR42_RS13785	0.47	+0.0
2,974,787	+		RR42_RS13785	0.47	-3.1
2,974,788	-		RR42_RS13785	0.47	+0.7
2,975,096	+		RR42_RS13785	0.75	-0.6
2,975,096	+		RR42_RS13785	0.75	+3.6
2,975,096	+		RR42_RS13785	0.75	+0.8
2,975,097	-		RR42_RS13785	0.75	+1.4
2,975,097	-		RR42_RS13785	0.75	-0.1
2,975,306	+				-0.6
2,975,457	+				-0.5
2,975,457	+				-0.3
2,975,873	-		RR42_RS13790	0.46	-3.2
2,975,916	+		RR42_RS13790	0.49	+0.9
2,975,916	+		RR42_RS13790	0.49	-0.9
2,975,917	-		RR42_RS13790	0.50	+0.6
2,975,917	-		RR42_RS13790	0.50	+1.9
2,975,917	-		RR42_RS13790	0.50	-2.9
2,975,985	+		RR42_RS13790	0.56	-0.2
2,975,985	+		RR42_RS13790	0.56	-0.9
2,976,115	+		RR42_RS13790	0.67	+0.5
2,976,190	+		RR42_RS13790	0.74	+0.0
2,976,190	+		RR42_RS13790	0.74	+1.1
2,976,190	+		RR42_RS13790	0.74	+0.6
2,976,190	+		RR42_RS13790	0.74	+0.6
2,976,190	+		RR42_RS13790	0.74	-0.5
2,976,191	-		RR42_RS13790	0.74	-2.6
2,976,191	-		RR42_RS13790	0.74	+0.3
2,976,216	+		RR42_RS13790	0.77	+1.0
2,976,216	+		RR42_RS13790	0.77	+1.3
2,976,216	+		RR42_RS13790	0.77	+0.5