Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13685

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,953,528	+				-0.3
2,953,625	-				+0.1
2,953,784	+		RR42_RS13680	0.20	+0.2
2,953,784	+		RR42_RS13680	0.20	+2.3
2,953,785	-		RR42_RS13680	0.21	+0.8
2,953,785	-		RR42_RS13680	0.21	-0.7
2,954,074	+		RR42_RS13680	0.55	-0.8
2,954,075	-		RR42_RS13680	0.55	-3.3
2,954,185	+		RR42_RS13680	0.69	+0.4
2,954,404	+				-2.1
2,954,405	-				-0.6
2,954,405	-				+0.8
2,954,405	-				+0.6
2,954,872	-		RR42_RS13685	0.67	-2.3
2,954,893	-		RR42_RS13685	0.71	-3.9
2,954,904	+		RR42_RS13685	0.73	+0.2
2,955,062	+				+0.5
2,955,157	-		RR42_RS13690	0.12	-0.0
2,955,157	-		RR42_RS13690	0.12	+0.5
2,955,203	-		RR42_RS13690	0.18	+0.3
2,955,229	+		RR42_RS13690	0.21	-0.8
2,955,230	-		RR42_RS13690	0.21	+0.3
2,955,230	-		RR42_RS13690	0.21	-0.3
2,955,349	+		RR42_RS13690	0.37	-0.1
2,955,476	+		RR42_RS13690	0.53	+0.8
2,955,476	+		RR42_RS13690	0.53	-0.6