Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12700

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,723,944	-				+0.0
2,723,999	-				-3.0
2,724,038	+				-1.2
2,724,157	-				+0.3
2,724,418	+				+1.1
2,724,465	+				+1.4
2,724,466	-				-1.0
2,724,466	-				+0.5
2,724,467	+				-1.1
2,724,468	-				+1.7
2,724,468	-				+0.4
2,724,561	+				+0.1
2,724,562	-				-0.4
2,724,562	-				-1.4
2,724,562	-				-0.1
2,724,562	-				+0.5
2,724,645	+		RR42_RS12695	0.39	+0.8
2,724,708	+		RR42_RS12695	0.60	+0.7
2,724,708	+		RR42_RS12695	0.60	-1.7
2,724,709	-		RR42_RS12695	0.61	-0.8
2,724,755	+		RR42_RS12695	0.77	-0.6
2,725,098	+		RR42_RS12700	0.21	-0.0
2,725,099	-		RR42_RS12700	0.21	+0.2
2,725,099	-		RR42_RS12700	0.21	-0.7
2,725,146	+		RR42_RS12700	0.27	-1.1
2,725,248	-		RR42_RS12700	0.40	+1.9
2,725,306	+		RR42_RS12700	0.48	+0.7
2,725,306	+		RR42_RS12700	0.48	-1.4
2,725,306	+		RR42_RS12700	0.48	+0.3
2,725,307	-		RR42_RS12700	0.48	+2.2
2,725,670	-				+1.3
2,726,077	+		RR42_RS12705	0.26	+0.4
2,726,077	+		RR42_RS12705	0.26	-1.2
2,726,078	-		RR42_RS12705	0.26	-0.2
2,726,082	+		RR42_RS12705	0.26	-0.1
2,726,083	-		RR42_RS12705	0.27	-0.3
2,726,125	-		RR42_RS12705	0.30	-0.4
2,726,125	-		RR42_RS12705	0.30	+0.3
2,726,125	-		RR42_RS12705	0.30	+0.1
2,726,125	-		RR42_RS12705	0.30	+0.6
2,726,205	+		RR42_RS12705	0.36	+1.8
2,726,205	+		RR42_RS12705	0.36	-0.0
2,726,600	-		RR42_RS12705	0.66	-0.9
2,726,600	-		RR42_RS12705	0.66	+0.6
2,726,600	-		RR42_RS12705	0.66	-1.5
2,726,600	-		RR42_RS12705	0.66	+0.3
2,726,601	+		RR42_RS12705	0.66	-0.6
2,726,602	-		RR42_RS12705	0.66	-1.9
2,726,602	-		RR42_RS12705	0.66	+1.9