Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12255

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,632,868	+		RR42_RS12250	0.26	+1.2
2,632,868	+		RR42_RS12250	0.26	-0.5
2,632,933	-		RR42_RS12250	0.31	-0.5
2,633,030	+		RR42_RS12250	0.40	-0.7
2,633,031	-		RR42_RS12250	0.40	+0.6
2,633,785	+				-2.2
2,633,869	+		RR42_RS12255	0.18	+1.8
2,633,869	+		RR42_RS12255	0.18	+0.8
2,633,992	+		RR42_RS12255	0.31	+0.7
2,633,992	+		RR42_RS12255	0.31	-2.0
2,634,244	+		RR42_RS12255	0.58	+1.4
2,634,244	+		RR42_RS12255	0.58	-1.2
2,634,244	+		RR42_RS12255	0.58	+1.4
2,634,244	+		RR42_RS12255	0.58	+0.1
2,634,244	+		RR42_RS12255	0.58	+0.5
2,634,244	+		RR42_RS12255	0.58	+1.2
2,634,244	+		RR42_RS12255	0.58	-2.6
2,634,245	-		RR42_RS12255	0.58	+0.0
2,634,245	-		RR42_RS12255	0.58	-1.0
2,634,449	-		RR42_RS12255	0.80	+0.7
2,634,449	-		RR42_RS12255	0.80	-0.2
2,634,478	+		RR42_RS12255	0.83	+2.4
2,634,479	-		RR42_RS12255	0.83	+0.4
2,634,479	-		RR42_RS12255	0.83	+1.6
2,634,548	-				+0.3
2,634,548	-				+0.8
2,634,788	+		RR42_RS12260	0.15	-0.2
2,634,788	+		RR42_RS12260	0.15	-2.6
2,634,807	-		RR42_RS12260	0.17	-0.6
2,634,859	+		RR42_RS12260	0.23	+0.0
2,634,859	+		RR42_RS12260	0.23	-0.7
2,634,860	-		RR42_RS12260	0.23	-1.2
2,635,244	+		RR42_RS12260	0.64	-0.6
2,635,439	+		RR42_RS12260	0.84	-0.8
2,635,439	+		RR42_RS12260	0.84	+0.7
2,635,440	-		RR42_RS12260	0.84	-0.5
2,635,440	-		RR42_RS12260	0.84	-0.7
2,635,486	-		RR42_RS12260	0.89	+1.1