Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12000

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,571,114	-		RR42_RS11995	0.57	-0.6
2,571,176	+		RR42_RS11995	0.61	+0.0
2,571,177	-		RR42_RS11995	0.61	-0.8
2,571,177	-		RR42_RS11995	0.61	-1.1
2,571,545	-		RR42_RS11995	0.80	+1.5
2,571,930	+				+0.2
2,571,931	-				-0.3
2,571,938	-				-1.2
2,571,938	-				-2.0
2,571,938	-				+0.3
2,572,011	+				+1.3
2,572,032	-				-0.6
2,572,077	-				-0.2
2,572,077	-				-0.9
2,572,211	+		RR42_RS12000	0.20	-2.0
2,572,236	-		RR42_RS12000	0.22	-2.3
2,572,547	+		RR42_RS12000	0.55	-0.5
2,572,548	-		RR42_RS12000	0.55	-2.2
2,572,548	-		RR42_RS12000	0.55	-0.2
2,572,548	-		RR42_RS12000	0.55	-1.5
2,572,551	-		RR42_RS12000	0.55	-2.0
2,572,739	+		RR42_RS12000	0.75	-0.2
2,572,740	-		RR42_RS12000	0.75	-1.2
2,572,740	-		RR42_RS12000	0.75	+0.1
2,572,740	-		RR42_RS12000	0.75	+0.6
2,572,740	-		RR42_RS12000	0.75	-1.5
2,572,740	-		RR42_RS12000	0.75	-0.1
2,572,896	-				+0.8
2,573,174	-		RR42_RS12005	0.20	-1.0
2,573,202	-		RR42_RS12005	0.23	-2.0
2,573,258	-		RR42_RS12005	0.29	-0.7
2,573,365	+		RR42_RS12005	0.40	+0.9
2,573,365	+		RR42_RS12005	0.40	-0.8
2,573,365	+		RR42_RS12005	0.40	-2.0
2,573,366	-		RR42_RS12005	0.40	+0.1
2,573,366	-		RR42_RS12005	0.40	-2.2
2,573,366	-		RR42_RS12005	0.40	+0.2
2,573,371	+		RR42_RS12005	0.40	-0.7
2,573,372	-		RR42_RS12005	0.41	+1.2
2,573,486	+		RR42_RS12005	0.52	-0.4
2,573,487	-		RR42_RS12005	0.53	-0.8
2,573,878	+				+0.3
2,573,879	-				+0.8