Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11980

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,565,533	+		RR42_RS11975	0.12	+0.1
2,565,601	+		RR42_RS11975	0.18	-1.2
2,565,601	+		RR42_RS11975	0.18	-0.2
2,565,602	-		RR42_RS11975	0.18	-0.6
2,565,602	-		RR42_RS11975	0.18	-0.2
2,565,648	+		RR42_RS11975	0.22	-1.1
2,565,786	-		RR42_RS11975	0.35	-2.0
2,566,041	+		RR42_RS11975	0.59	-0.7
2,566,041	+		RR42_RS11975	0.59	+0.2
2,566,042	-		RR42_RS11975	0.59	+0.3
2,566,042	-		RR42_RS11975	0.59	+0.1
2,566,054	+		RR42_RS11975	0.60	-1.3
2,566,694	+		RR42_RS11980	0.26	-3.0
2,566,784	+		RR42_RS11980	0.36	-0.6
2,566,784	+		RR42_RS11980	0.36	+0.3
2,566,785	-		RR42_RS11980	0.36	-1.7
2,566,809	+		RR42_RS11980	0.39	+0.2
2,566,810	-		RR42_RS11980	0.39	-4.4
2,566,983	-		RR42_RS11980	0.58	+1.1
2,566,983	-		RR42_RS11980	0.58	-1.8
2,566,983	-		RR42_RS11980	0.58	-0.8
2,567,181	-		RR42_RS11980	0.79	-0.2
2,567,359	+				+0.8
2,567,384	-				+0.8
2,567,384	-				-1.3
2,567,384	-				-3.4
2,567,388	-				+0.7
2,567,389	+				-2.1
2,567,390	-				+1.1
2,567,785	+		RR42_RS11985	0.44	+1.0
2,567,785	+		RR42_RS11985	0.44	+1.4
2,567,785	+		RR42_RS11985	0.44	+1.4
2,567,786	-		RR42_RS11985	0.44	+0.4
2,567,799	-		RR42_RS11985	0.45	-1.4
2,568,318	+				+0.3