Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11900

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,545,908	-		RR42_RS11895	0.26	+0.4
2,545,908	-		RR42_RS11895	0.26	-0.6
2,545,929	-		RR42_RS11895	0.28	+0.4
2,545,968	-		RR42_RS11895	0.31	-0.9
2,545,998	-		RR42_RS11895	0.34	+1.1
2,546,001	+		RR42_RS11895	0.34	-1.4
2,546,001	+		RR42_RS11895	0.34	-2.0
2,546,001	+		RR42_RS11895	0.34	+1.0
2,546,001	+		RR42_RS11895	0.34	+0.0
2,546,006	+		RR42_RS11895	0.35	-1.3
2,546,007	-		RR42_RS11895	0.35	+0.4
2,546,072	+		RR42_RS11895	0.40	+0.2
2,546,078	+		RR42_RS11895	0.41	-0.1
2,546,078	+		RR42_RS11895	0.41	+0.6
2,546,079	-		RR42_RS11895	0.41	-0.6
2,546,079	-		RR42_RS11895	0.41	-2.8
2,546,079	-		RR42_RS11895	0.41	-0.2
2,546,103	-		RR42_RS11895	0.43	-1.6
2,546,159	+		RR42_RS11895	0.48	-2.1
2,546,159	+		RR42_RS11895	0.48	+0.2
2,546,159	+		RR42_RS11895	0.48	-0.8
2,546,160	-		RR42_RS11895	0.48	-1.4
2,546,160	-		RR42_RS11895	0.48	+0.0
2,546,462	+		RR42_RS11895	0.74	-1.5
2,546,462	+		RR42_RS11895	0.74	+1.2
2,546,463	-		RR42_RS11895	0.74	+0.3
2,546,565	-		RR42_RS11895	0.83	+2.2
2,546,565	-		RR42_RS11895	0.83	+2.1
2,546,760	+				-0.3
2,546,761	-				-0.0
2,546,927	+				+0.5
2,546,928	-				+0.6
2,547,067	+		RR42_RS11900	0.34	+0.6
2,547,314	+		RR42_RS11900	0.81	+0.4
2,547,314	+		RR42_RS11900	0.81	+1.1
2,547,315	-		RR42_RS11900	0.81	-0.2
2,547,433	+				+3.1
2,547,433	+				+0.5
2,547,434	-				+0.9