Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11795

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,521,643	-		RR42_RS11790	0.78	-1.4
2,521,663	+		RR42_RS11790	0.79	+2.4
2,521,663	+		RR42_RS11790	0.79	-0.2
2,521,663	+		RR42_RS11790	0.79	-1.7
2,521,663	+		RR42_RS11790	0.79	-0.1
2,521,664	-		RR42_RS11790	0.79	-1.5
2,521,726	+		RR42_RS11790	0.81	-3.3
2,522,144	-				-1.8
2,522,144	-				-3.0
2,522,171	+				-3.5
2,522,190	+				-2.7
2,522,190	+				-2.9
2,522,191	-				-0.2
2,522,217	+				-0.2
2,522,217	+				-2.4
2,522,254	+				-3.2
2,522,385	+				-1.2
2,522,437	+				+0.0
2,522,437	+				-2.4
2,522,550	+				-1.5
2,522,550	+				+0.8
2,522,550	+				-0.1
2,522,701	+		RR42_RS11795	0.20	-1.7
2,522,701	+		RR42_RS11795	0.20	-1.2
2,523,020	-		RR42_RS11795	0.59	-0.8
2,523,346	+				+1.1
2,523,346	+				+0.1
2,523,346	+				-1.7
2,523,346	+				+0.0
2,523,347	-				-1.0
2,523,347	-				+0.3
2,523,832	+		RR42_RS11800	0.50	-0.2
2,523,832	+		RR42_RS11800	0.50	-1.0
2,523,889	+		RR42_RS11800	0.58	+1.5
2,524,045	-		RR42_RS11800	0.78	+1.0
2,524,045	-		RR42_RS11800	0.78	+1.2
2,524,045	-		RR42_RS11800	0.78	-2.4
2,524,045	-		RR42_RS11800	0.78	-0.1
2,524,045	-		RR42_RS11800	0.78	-0.2
2,524,045	-		RR42_RS11800	0.78	-0.6
2,524,095	+		RR42_RS11800	0.84	-0.4
2,524,095	+		RR42_RS11800	0.84	+0.1
2,524,095	+		RR42_RS11800	0.84	+1.0
2,524,096	-		RR42_RS11800	0.84	-1.3
2,524,096	-		RR42_RS11800	0.84	-1.3