Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11275

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,411,155	-		RR42_RS11270	0.67	+2.0
2,411,208	+		RR42_RS11270	0.69	-2.9
2,411,233	-		RR42_RS11270	0.70	-0.8
2,411,233	-		RR42_RS11270	0.70	-1.2
2,411,383	-		RR42_RS11270	0.76	-3.6
2,411,589	+		RR42_RS11270	0.84	-2.8
2,411,589	+		RR42_RS11270	0.84	-0.6
2,411,589	+		RR42_RS11270	0.84	-2.8
2,411,589	+		RR42_RS11270	0.84	-3.2
2,411,589	+		RR42_RS11270	0.84	-1.5
2,411,589	+		RR42_RS11270	0.84	-1.8
2,411,590	-		RR42_RS11270	0.84	-1.8
2,411,590	-		RR42_RS11270	0.84	-0.5
2,411,590	-		RR42_RS11270	0.84	-2.4
2,411,817	+				+0.2
2,411,940	+				+1.2
2,411,941	-				-1.1
2,411,941	-				+0.3
2,411,941	-				-3.1
2,412,006	+				-1.6
2,412,049	-				+0.8
2,412,058	+				+0.0
2,412,059	-				-2.2
2,412,125	+				-0.8
2,412,125	+				+2.2
2,412,125	+				-1.5
2,412,125	+				-1.4
2,412,126	-				-2.1
2,412,126	-				+1.4
2,412,126	-				-0.8
2,412,126	-				-1.2
2,412,126	-				-0.4
2,412,126	-				-2.8
2,412,249	-		RR42_RS11275	0.13	-1.2
2,412,534	+		RR42_RS11275	0.37	-2.4
2,412,534	+		RR42_RS11275	0.37	-0.4
2,412,535	-		RR42_RS11275	0.37	-1.6
2,412,535	-		RR42_RS11275	0.37	-1.8
2,412,886	+		RR42_RS11275	0.67	-2.5
2,412,887	-		RR42_RS11275	0.67	-2.7
2,412,887	-		RR42_RS11275	0.67	-0.1
2,412,950	+		RR42_RS11275	0.72	-0.6
2,412,951	-		RR42_RS11275	0.72	-0.8
2,412,951	-		RR42_RS11275	0.72	-0.0
2,412,951	-		RR42_RS11275	0.72	-0.4
2,413,353	-				-1.2
2,413,360	+				-0.2
2,413,360	+				-0.0
2,413,361	-				+1.0
2,413,361	-				+0.1
2,413,368	+				+2.2
2,413,368	+				-0.0
2,413,368	+				-0.1
2,413,368	+				-3.1
2,413,369	-				-1.3
2,413,609	+				+0.9
2,413,610	-				-0.4
2,413,620	+				+1.1
2,413,621	-				+0.5
2,413,621	-				-1.6
2,413,621	-				+0.1
2,413,867	+		RR42_RS11280	0.48	+0.6
2,413,966	+		RR42_RS11280	0.71	-1.7
2,414,096	-				-2.1
2,414,154	-				+1.2
2,414,172	-				-0.6
2,414,172	-				-1.7