Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10585

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,260,705	+		RR42_RS10580	0.18	+0.2
2,260,706	-		RR42_RS10580	0.18	+0.7
2,260,769	+		RR42_RS10580	0.24	+0.6
2,260,769	+		RR42_RS10580	0.24	+1.3
2,260,769	+		RR42_RS10580	0.24	+2.1
2,260,824	-		RR42_RS10580	0.30	-1.3
2,260,909	+		RR42_RS10580	0.38	+0.6
2,260,946	-		RR42_RS10580	0.42	-0.6
2,261,756	+		RR42_RS10585	0.19	-1.9
2,261,756	+		RR42_RS10585	0.19	-0.2
2,261,940	+		RR42_RS10585	0.50	-0.7
2,261,940	+		RR42_RS10585	0.50	+1.5
2,261,941	-		RR42_RS10585	0.50	+0.6
2,261,941	-		RR42_RS10585	0.50	+0.7
2,261,949	-		RR42_RS10585	0.51	-0.3
2,261,949	-		RR42_RS10585	0.51	+3.7
2,261,949	-		RR42_RS10585	0.51	+1.7
2,262,076	-		RR42_RS10585	0.72	+1.4
2,262,076	-		RR42_RS10585	0.72	-1.6
2,262,309	-				-1.0
2,262,467	+		RR42_RS10590	0.86	-0.9
2,262,468	-		RR42_RS10590	0.86	+0.0
2,262,496	-				+0.7
2,262,496	-				+0.0
2,262,505	+				+0.1
2,262,506	-				-0.6
2,262,506	-				-1.5
2,262,506	-				-1.9
2,262,571	-				+0.0
2,262,607	+				+0.9
2,262,608	-				-1.3
2,262,664	+				-0.1
2,262,801	-				+0.3
2,262,836	+				+0.8
2,262,836	+				-1.0
2,262,837	-				-1.8
2,263,091	+				-2.2
2,263,092	-				-1.7
2,263,092	-				+0.2
2,263,095	-				+1.0