Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10260

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,195,464	+		RR42_RS10255	0.19	+0.6
2,195,465	-		RR42_RS10255	0.19	-1.1
2,195,465	-		RR42_RS10255	0.19	+0.4
2,195,466	-		RR42_RS10255	0.19	-0.2
2,195,601	-		RR42_RS10255	0.37	+1.9
2,195,601	-		RR42_RS10255	0.37	+0.5
2,195,601	-		RR42_RS10255	0.37	-0.2
2,195,675	+		RR42_RS10255	0.46	+0.6
2,195,836	+		RR42_RS10255	0.67	+0.1
2,196,172	+				-2.2
2,196,172	+				+1.0
2,196,173	-				+0.2
2,196,186	-				-0.9
2,196,638	-		RR42_RS10260	0.43	-0.3
2,196,638	-		RR42_RS10260	0.43	-2.2
2,196,809	+		RR42_RS10260	0.58	-4.7
2,196,810	-		RR42_RS10260	0.58	-1.4
2,196,870	+		RR42_RS10260	0.63	+0.2
2,197,459	+				-1.7
2,197,582	+		RR42_RS10265	0.12	+0.8
2,197,709	-		RR42_RS10265	0.18	-2.2
2,197,955	-		RR42_RS10265	0.30	+0.9
2,198,021	+		RR42_RS10265	0.33	+0.1
2,198,022	-		RR42_RS10265	0.33	-0.8
2,198,190	-		RR42_RS10265	0.41	-0.5
2,198,269	+		RR42_RS10265	0.45	-0.5
2,198,270	-		RR42_RS10265	0.45	-0.6
2,198,283	+		RR42_RS10265	0.46	+1.7
2,198,284	-		RR42_RS10265	0.46	-0.4