Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10025

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,140,409	+		RR42_RS10015	0.69	+0.2
2,140,409	+		RR42_RS10015	0.69	-0.5
2,140,410	-		RR42_RS10015	0.69	-0.8
2,140,537	+		RR42_RS10015	0.79	-2.9
2,140,537	+		RR42_RS10015	0.79	+0.6
2,140,538	-		RR42_RS10015	0.79	+1.6
2,140,662	-		RR42_RS10015	0.89	-0.0
2,140,662	-		RR42_RS10015	0.89	-0.1
2,140,662	-		RR42_RS10015	0.89	-0.1
2,140,839	+				-1.7
2,140,839	+				-0.7
2,140,839	+				-1.6
2,140,839	+				+0.5
2,140,839	+				-0.7
2,140,839	+				+0.3
2,140,840	-				-2.7
2,140,884	+				+0.2
2,140,983	+		RR42_RS10020	0.34	+1.5
2,140,983	+		RR42_RS10020	0.34	-0.6
2,141,091	+		RR42_RS10020	0.65	-0.1
2,141,100	+		RR42_RS10020	0.68	-2.2
2,141,101	-		RR42_RS10020	0.68	+0.4
2,141,101	-		RR42_RS10020	0.68	+1.2
2,141,101	-		RR42_RS10020	0.68	+0.4
2,141,307	+				+0.2
2,141,428	+		RR42_RS10025	0.46	+0.3
2,141,428	+		RR42_RS10025	0.46	+1.0
2,141,428	+		RR42_RS10025	0.46	-0.9
2,141,428	+		RR42_RS10025	0.46	+5.6
2,141,429	-		RR42_RS10025	0.46	+0.4
2,141,429	-		RR42_RS10025	0.46	+1.2
2,141,449	-		RR42_RS10025	0.54	-1.4
2,141,526	+		RR42_RS10025	0.82	+0.5
2,141,526	+		RR42_RS10025	0.82	+0.7
2,141,527	-		RR42_RS10025	0.82	+0.8
2,141,527	-		RR42_RS10025	0.82	-1.3
2,141,528	+		RR42_RS10025	0.82	+1.0
2,141,528	+		RR42_RS10025	0.82	-2.4
2,141,528	+		RR42_RS10025	0.82	-0.4
2,141,528	+		RR42_RS10025	0.82	-0.9
2,141,528	+		RR42_RS10025	0.82	-0.1
2,141,529	-		RR42_RS10025	0.83	-0.0
2,141,529	-		RR42_RS10025	0.83	-0.7
2,141,529	-		RR42_RS10025	0.83	+0.6
2,141,529	-		RR42_RS10025	0.83	-0.5
2,141,529	-		RR42_RS10025	0.83	+1.0
2,141,529	-		RR42_RS10025	0.83	-0.5
2,141,668	+				+2.5
2,141,977	+		RR42_RS10030	0.19	-1.4
2,141,977	+		RR42_RS10030	0.19	-1.5
2,141,977	+		RR42_RS10030	0.19	-0.0
2,141,978	-		RR42_RS10030	0.20	-0.1
2,141,978	-		RR42_RS10030	0.20	-1.4
2,142,001	+		RR42_RS10030	0.26	-0.9
2,142,058	+		RR42_RS10030	0.40	+0.6
2,142,058	+		RR42_RS10030	0.40	-0.7
2,142,058	+		RR42_RS10030	0.40	-3.4
2,142,058	+		RR42_RS10030	0.40	-0.5
2,142,058	+		RR42_RS10030	0.40	-1.7
2,142,059	-		RR42_RS10030	0.41	-1.3
2,142,193	+		RR42_RS10030	0.75	+0.8
2,142,193	+		RR42_RS10030	0.75	-0.4
2,142,194	-		RR42_RS10030	0.75	-1.7
2,142,194	-		RR42_RS10030	0.75	-0.6
2,142,226	+		RR42_RS10030	0.83	+1.1
2,142,226	+		RR42_RS10030	0.83	+0.1
2,142,227	-		RR42_RS10030	0.84	-1.9
2,142,252	+				-0.0
2,142,305	+				-0.3
2,142,306	-				-1.9
2,142,306	-				-0.1
2,142,306	-				-2.6
2,142,548	+				-2.2
2,142,549	-				+0.0
2,142,552	-				-0.8
2,142,552	-				-1.1