Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09995

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,134,859	-		RR42_RS09990	0.70	-0.1
2,134,864	-		RR42_RS09990	0.70	+0.2
2,135,024	+		RR42_RS09990	0.82	+0.6
2,135,068	-		RR42_RS09990	0.85	+0.5
2,135,097	+		RR42_RS09990	0.87	+0.6
2,135,113	+		RR42_RS09990	0.88	+0.4
2,135,218	-				+1.4
2,135,299	+				+0.2
2,135,331	+				+0.5
2,135,331	+				+1.6
2,135,332	-				-0.1
2,135,332	-				-1.6
2,135,336	-				-0.6
2,135,336	-				-1.3
2,135,358	+				+0.1
2,135,359	-				-1.3
2,135,494	-				+0.5
2,135,669	+				-0.5
2,135,786	-				+0.8
2,135,786	-				-0.7
2,135,802	+				+0.5
2,135,802	+				+0.8
2,135,803	-				+0.5
2,136,021	-		RR42_RS09995	0.24	-1.7
2,136,240	+		RR42_RS09995	0.48	+0.6
2,136,243	+		RR42_RS09995	0.48	+1.8
2,136,243	+		RR42_RS09995	0.48	+2.5
2,136,409	+		RR42_RS09995	0.67	+0.6
2,136,409	+		RR42_RS09995	0.67	-1.2
2,136,428	+		RR42_RS09995	0.69	+0.8
2,136,651	+				+0.2
2,136,768	+				-0.2
2,136,808	+				+1.7
2,136,808	+				+1.3
2,136,808	+				-0.7
2,136,809	-				-1.7
2,137,011	-		RR42_RS10000	0.22	-0.4
2,137,134	-		RR42_RS10000	0.36	+0.4
2,137,418	+		RR42_RS10000	0.67	-1.5