Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09910

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,113,888	-		RR42_RS09905	0.33	+2.5
2,113,888	-		RR42_RS09905	0.33	+0.1
2,114,075	+		RR42_RS09905	0.47	-0.4
2,114,075	+		RR42_RS09905	0.47	-2.2
2,114,075	+		RR42_RS09905	0.47	+0.3
2,114,110	+		RR42_RS09905	0.49	-1.4
2,114,157	+		RR42_RS09905	0.53	+1.0
2,114,230	-		RR42_RS09905	0.59	-2.2
2,114,359	-		RR42_RS09905	0.68	+1.2
2,114,371	-		RR42_RS09905	0.69	-0.3
2,114,613	-		RR42_RS09905	0.88	-1.5
2,114,631	-		RR42_RS09905	0.89	-1.2
2,114,903	+		RR42_RS09910	0.15	+0.8
2,114,903	+		RR42_RS09910	0.15	-0.8
2,114,903	+		RR42_RS09910	0.15	+0.2
2,114,904	-		RR42_RS09910	0.15	+0.5
2,114,926	+		RR42_RS09910	0.18	+0.4
2,114,962	-		RR42_RS09910	0.23	-0.2
2,115,052	-		RR42_RS09910	0.34	-1.4
2,115,070	+		RR42_RS09910	0.36	+0.2
2,115,070	+		RR42_RS09910	0.36	-0.4
2,115,112	+		RR42_RS09910	0.41	-1.2
2,115,113	-		RR42_RS09910	0.41	-1.1
2,115,113	-		RR42_RS09910	0.41	+1.3
2,115,128	-		RR42_RS09910	0.43	+0.4
2,115,128	-		RR42_RS09910	0.43	-1.3
2,115,229	+		RR42_RS09910	0.56	-2.7
2,115,358	+		RR42_RS09910	0.72	-0.4
2,115,358	+		RR42_RS09910	0.72	-3.5
2,115,359	-		RR42_RS09910	0.72	+0.1
2,115,389	+		RR42_RS09910	0.76	+0.5
2,115,390	-		RR42_RS09910	0.76	-0.0
2,115,611	+				-1.2
2,115,612	-				+2.4
2,115,612	-				-0.7
2,115,899	+		RR42_RS09915	0.21	-0.3
2,115,900	-		RR42_RS09915	0.21	+0.5
2,115,984	+		RR42_RS09915	0.28	+0.2
2,115,987	-		RR42_RS09915	0.28	+0.5
2,115,987	-		RR42_RS09915	0.28	-0.1
2,116,077	-		RR42_RS09915	0.35	+0.1
2,116,077	-		RR42_RS09915	0.35	-0.4
2,116,230	+		RR42_RS09915	0.47	+1.8
2,116,306	-		RR42_RS09915	0.53	-0.2
2,116,355	+		RR42_RS09915	0.57	+0.6
2,116,355	+		RR42_RS09915	0.57	-0.9
2,116,355	+		RR42_RS09915	0.57	-1.0
2,116,356	-		RR42_RS09915	0.57	+0.9
2,116,412	+		RR42_RS09915	0.62	-0.7