Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09745

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,074,681	+		RR42_RS09740	0.33	-0.3
2,074,681	+		RR42_RS09740	0.33	-1.1
2,074,681	+		RR42_RS09740	0.33	+0.6
2,074,681	+		RR42_RS09740	0.33	-0.7
2,074,681	+		RR42_RS09740	0.33	+0.1
2,074,681	+		RR42_RS09740	0.33	-1.4
2,074,681	+		RR42_RS09740	0.33	+1.4
2,074,682	-		RR42_RS09740	0.33	+0.6
2,074,682	-		RR42_RS09740	0.33	-0.8
2,074,682	-		RR42_RS09740	0.33	+0.6
2,074,682	-		RR42_RS09740	0.33	+1.5
2,074,682	-		RR42_RS09740	0.33	-1.4
2,074,686	-		RR42_RS09740	0.33	-0.4
2,074,686	-		RR42_RS09740	0.33	-0.1
2,074,781	+		RR42_RS09740	0.43	+0.4
2,074,957	+		RR42_RS09740	0.61	-2.5
2,075,095	-		RR42_RS09740	0.75	-2.2
2,075,095	-		RR42_RS09740	0.75	+0.8
2,075,183	-		RR42_RS09740	0.84	+0.0
2,075,240	-		RR42_RS09740	0.90	+0.0
2,075,240	-		RR42_RS09740	0.90	-2.2
2,075,240	-		RR42_RS09740	0.90	+0.4
2,075,240	-		RR42_RS09740	0.90	+1.4
2,075,310	+				-1.3
2,075,310	+				+1.3
2,075,311	-				-0.9
2,075,319	-				-0.5
2,075,479	-				-2.2
2,075,479	-				+0.8
2,075,554	+				-1.1
2,075,555	-				-0.5
2,075,555	-				+1.0
2,075,555	-				-1.4
2,075,555	-				-1.0
2,075,557	+				-1.2
2,075,558	-				+1.0
2,075,558	-				-3.3
2,075,558	-				-0.3
2,075,558	-				+0.2
2,075,558	-				-0.2
2,075,587	+				+0.2
2,075,587	+				-0.2
2,075,588	-				-3.4
2,075,827	+		RR42_RS09745	0.21	-0.4
2,076,097	-		RR42_RS09745	0.48	-1.7
2,076,097	-		RR42_RS09745	0.48	-1.7
2,076,198	+		RR42_RS09745	0.58	-2.1
2,076,198	+		RR42_RS09745	0.58	+1.5
2,076,212	-		RR42_RS09745	0.60	+0.6
2,076,222	+		RR42_RS09745	0.61	+0.1
2,076,222	+		RR42_RS09745	0.61	-0.2
2,076,222	+		RR42_RS09745	0.61	-0.7
2,076,243	+		RR42_RS09745	0.63	-2.7
2,076,252	+		RR42_RS09745	0.63	+0.1
2,076,268	+		RR42_RS09745	0.65	-1.2
2,076,269	-		RR42_RS09745	0.65	-0.6
2,076,322	-		RR42_RS09745	0.70	-0.5
2,076,322	-		RR42_RS09745	0.70	+0.6
2,076,389	+		RR42_RS09745	0.77	+0.9
2,076,648	+				-0.8
2,076,648	+				+0.1
2,076,648	+				+1.0
2,076,649	-				+0.1
2,076,725	+				+0.4
2,076,767	+				+0.2
2,076,767	+				-0.6
2,076,768	-				+0.1
2,076,817	+				+0.6
2,076,817	+				-0.5
2,076,817	+				+0.3
2,076,818	-				+0.2
2,076,818	-				+3.5
2,076,933	+		RR42_RS09750	0.15	-0.1
2,076,956	-		RR42_RS09750	0.17	+1.7
2,076,956	-		RR42_RS09750	0.17	-0.4
2,076,979	+		RR42_RS09750	0.20	-1.7
2,076,979	+		RR42_RS09750	0.20	-0.0
2,076,979	+		RR42_RS09750	0.20	-0.6
2,076,979	+		RR42_RS09750	0.20	+1.6
2,076,979	+		RR42_RS09750	0.20	+0.6
2,076,980	-		RR42_RS09750	0.20	-1.5
2,077,153	+		RR42_RS09750	0.41	-1.8
2,077,153	+		RR42_RS09750	0.41	+0.4
2,077,153	+		RR42_RS09750	0.41	-0.1
2,077,154	-		RR42_RS09750	0.41	-1.7
2,077,154	-		RR42_RS09750	0.41	+1.8
2,077,154	-		RR42_RS09750	0.41	-0.0
2,077,233	+		RR42_RS09750	0.51	+1.2
2,077,234	-		RR42_RS09750	0.51	+1.9
2,077,550	-		RR42_RS09750	0.89	-0.0