Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09505

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,014,766	+		RR42_RS09500	0.72	+1.0
2,014,766	+		RR42_RS09500	0.72	-1.9
2,014,766	+		RR42_RS09500	0.72	+0.7
2,014,767	-		RR42_RS09500	0.72	+0.1
2,014,767	-		RR42_RS09500	0.72	+1.1
2,014,767	-		RR42_RS09500	0.72	+0.1
2,014,769	-		RR42_RS09500	0.72	+1.5
2,014,769	-		RR42_RS09500	0.72	-0.5
2,014,769	-		RR42_RS09500	0.72	+0.8
2,014,903	+		RR42_RS09500	0.85	-0.9
2,015,011	+				-0.3
2,015,011	+				-1.2
2,015,012	-				+0.1
2,015,122	+				+0.1
2,015,122	+				+0.2
2,015,454	+		RR42_RS09505	0.21	+1.3
2,015,454	+		RR42_RS09505	0.21	-0.0
2,015,510	+		RR42_RS09505	0.27	-1.3
2,015,510	+		RR42_RS09505	0.27	+1.0
2,015,510	+		RR42_RS09505	0.27	-0.2
2,015,510	+		RR42_RS09505	0.27	+1.0
2,015,511	-		RR42_RS09505	0.27	-0.8
2,015,552	+		RR42_RS09505	0.32	-0.9
2,015,568	-		RR42_RS09505	0.33	-1.5
2,015,621	+		RR42_RS09505	0.39	-0.2
2,015,622	-		RR42_RS09505	0.39	-0.2
2,015,622	-		RR42_RS09505	0.39	-0.7
2,015,672	+		RR42_RS09505	0.45	+2.2
2,015,786	+		RR42_RS09505	0.57	+2.3
2,015,787	-		RR42_RS09505	0.57	-0.2
2,015,873	+		RR42_RS09505	0.67	-0.6
2,015,880	-		RR42_RS09505	0.67	+1.9
2,015,882	+		RR42_RS09505	0.68	-1.3
2,015,883	-		RR42_RS09505	0.68	+1.7
2,015,943	+		RR42_RS09505	0.74	-0.9
2,015,943	+		RR42_RS09505	0.74	+0.9
2,016,152	+				+1.1
2,016,152	+				-1.8
2,016,153	-				+0.2
2,016,255	+				+0.3
2,016,257	-				+0.3
2,016,290	+				-0.5
2,016,290	+				-0.2
2,016,291	-				-0.3
2,016,291	-				+0.4
2,016,291	-				-0.2
2,016,343	+				-0.3
2,016,344	-				+1.4
2,016,390	+				+1.5
2,016,391	-				+0.5
2,016,391	-				+0.8
2,016,392	+				+0.2
2,016,393	-				-1.1
2,016,574	+		RR42_RS09510	0.12	+2.2
2,016,574	+		RR42_RS09510	0.12	+0.7
2,016,575	-		RR42_RS09510	0.12	+2.5
2,016,575	-				-1.3
2,016,741	-		RR42_RS09510	0.29	+0.1
2,016,863	-		RR42_RS09510	0.42	-0.5
2,016,863	-		RR42_RS09510	0.42	+0.1
2,017,171	+		RR42_RS09510	0.74	+1.2
2,017,172	-		RR42_RS09510	0.74	+1.8
2,017,172	-		RR42_RS09510	0.74	-0.7