Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09470

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,008,572	+		RR42_RS09465	0.47	+0.1
2,008,572	+		RR42_RS09465	0.47	+1.2
2,008,572	+		RR42_RS09465	0.47	-0.7
2,008,573	-		RR42_RS09465	0.47	+0.3
2,008,573	-		RR42_RS09465	0.47	+1.1
2,008,573	-		RR42_RS09465	0.47	-0.6
2,008,694	-		RR42_RS09465	0.59	-1.0
2,008,800	-		RR42_RS09465	0.70	-0.8
2,008,811	-		RR42_RS09465	0.71	-2.2
2,008,823	-		RR42_RS09465	0.72	-2.3
2,008,823	-		RR42_RS09465	0.72	-0.6
2,008,823	-		RR42_RS09465	0.72	+0.1
2,008,854	+		RR42_RS09465	0.76	-0.1
2,008,854	+		RR42_RS09465	0.76	+0.0
2,008,854	+		RR42_RS09465	0.76	-0.6
2,008,854	+		RR42_RS09465	0.76	+0.7
2,008,855	-		RR42_RS09465	0.76	+0.5
2,008,855	-		RR42_RS09465	0.76	+1.1
2,009,078	+				+0.4
2,009,079	-				-0.4
2,009,349	-		RR42_RS09470	0.25	-0.6
2,009,735	+		RR42_RS09470	0.66	-2.2
2,010,109	-				+0.1
2,010,174	+		RR42_RS09475	0.16	-0.8
2,010,175	-		RR42_RS09475	0.16	+0.5
2,010,259	+		RR42_RS09475	0.27	-0.3
2,010,259	+		RR42_RS09475	0.27	-0.5
2,010,259	+		RR42_RS09475	0.27	+1.2
2,010,259	+		RR42_RS09475	0.27	+1.5
2,010,582	-		RR42_RS09475	0.69	+0.3
2,010,627	+		RR42_RS09475	0.75	-1.0
2,010,627	+		RR42_RS09475	0.75	-0.3
2,010,781	+				-0.4
2,010,782	-				-0.1
2,010,955	+		RR42_RS09480	0.16	+0.0