Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08875

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,863,048	+		RR42_RS08870	0.56	+0.1
1,863,048	+		RR42_RS08870	0.56	+0.2
1,863,049	-		RR42_RS08870	0.56	-0.4
1,863,049	-		RR42_RS08870	0.56	-2.4
1,863,136	-		RR42_RS08870	0.64	+0.3
1,863,136	-		RR42_RS08870	0.64	-0.6
1,863,311	+		RR42_RS08870	0.80	-4.2
1,863,339	+		RR42_RS08870	0.83	-0.9
1,863,339	+		RR42_RS08870	0.83	-0.4
1,863,340	-		RR42_RS08870	0.83	-0.6
1,863,340	-		RR42_RS08870	0.83	-0.1
1,863,639	+		RR42_RS08875	0.17	-0.4
1,863,639	+		RR42_RS08875	0.17	+0.8
1,863,639	+		RR42_RS08875	0.17	-0.6
1,863,640	-		RR42_RS08875	0.17	+0.1
1,863,640	-		RR42_RS08875	0.17	-0.0
1,863,912	-		RR42_RS08875	0.78	+0.1
1,863,965	+		RR42_RS08875	0.90	+0.6
1,863,965	+		RR42_RS08875	0.90	+1.5
1,863,966	-		RR42_RS08875	0.90	+0.8
1,864,176	+				-1.3
1,864,176	+				+0.7
1,864,176	+				+0.2
1,864,177	-				-0.8
1,864,181	+				-1.8
1,864,181	+				+1.3
1,864,181	+				-0.6
1,864,182	-				+0.3
1,864,468	+				+1.0
1,864,589	+		RR42_RS08880	0.37	-0.0
1,864,754	-				+0.3
1,864,785	-				+1.7
1,864,809	+				+0.9
1,864,809	+				+0.5
1,864,810	-				-0.6
1,864,970	+				+1.4
1,864,971	-				+0.1