Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08570

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,800,637	-				-1.3
1,800,637	-				-0.9
1,801,129	+		RR42_RS08565	0.66	-2.3
1,801,294	+				+2.4
1,801,295	-				-1.6
1,801,295	-				-0.3
1,801,346	-				+1.5
1,801,348	+				-0.8
1,801,349	-				+1.6
1,801,349	-				+0.4
1,801,483	+				-0.3
1,801,483	+				-0.6
1,801,537	+		RR42_RS08570	0.12	+2.3
1,801,537	+		RR42_RS08570	0.12	-1.6
1,801,538	-		RR42_RS08570	0.12	+0.7
1,801,573	+		RR42_RS08570	0.15	-0.4
1,801,591	+		RR42_RS08570	0.16	-1.0
1,801,592	-		RR42_RS08570	0.16	-3.3
1,801,680	+		RR42_RS08570	0.21	-0.3
1,801,680	+		RR42_RS08570	0.21	+2.1
1,801,681	-		RR42_RS08570	0.21	-0.1
1,801,713	-		RR42_RS08570	0.23	-2.3
1,801,744	+		RR42_RS08570	0.25	+1.2
1,801,745	-		RR42_RS08570	0.26	+0.8
1,801,801	+		RR42_RS08570	0.29	-1.8
1,801,893	+		RR42_RS08570	0.35	+2.2
1,801,894	-		RR42_RS08570	0.35	-1.1
1,802,106	-		RR42_RS08570	0.48	-0.2
1,802,240	-		RR42_RS08570	0.57	-3.4
1,802,256	+		RR42_RS08570	0.58	-0.1
1,802,677	+		RR42_RS08570	0.85	+0.4
1,802,943	-				-0.8
1,803,284	+		RR42_RS08575	0.67	-1.6
1,803,589	-		RR42_RS08580	0.14	-3.7
1,803,640	-		RR42_RS08580	0.20	-0.4
1,803,640	-		RR42_RS08580	0.20	+0.2
1,803,702	+		RR42_RS08580	0.27	-1.1
1,803,702	+		RR42_RS08580	0.27	+0.6
1,803,703	-		RR42_RS08580	0.27	+1.6