Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08425

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,777,622	-				-1.7
1,777,622	-				-2.9
1,777,634	-				-0.1
1,777,641	+				-1.9
1,777,642	-				-0.3
1,777,711	+				-0.0
1,777,714	+				-0.5
1,777,889	+				-1.6
1,777,890	-				-0.0
1,777,890	-				-1.0
1,777,924	+				+1.1
1,777,925	-				+0.7
1,778,074	+				+0.9
1,778,155	+				+1.1
1,778,156	-				-2.3
1,778,156	-				+0.7
1,778,156	-				-1.6
1,778,156	-				+2.1
1,778,207	+				+0.2
1,778,208	-				-0.6
1,778,239	-				-1.1
1,778,239	-				-0.9
1,778,280	+				+0.1
1,778,280	+				-1.6
1,778,280	+				+3.1
1,778,318	+				-0.6
1,778,404	+				+0.7
1,778,405	-				-2.9
1,778,405	-				-1.6
1,778,405	-				-0.9
1,778,540	+				-1.6
1,778,540	+				+0.3
1,778,551	-				-1.2
1,778,857	+		RR42_RS08425	0.45	-0.9
1,779,128	+		RR42_RS08425	0.88	-1.9
1,779,150	-				-0.2
1,779,382	-				-1.6
1,779,382	-				-0.0
1,779,470	+				+1.3
1,779,471	-				-0.9
1,779,511	+				+0.1
1,779,514	+				+1.2
1,779,514	+				-0.0
1,779,520	+				+1.7
1,779,565	+				+0.3
1,779,679	+				-0.5
1,779,680	-				-1.3
1,779,681	+				-1.3
1,779,682	-				-0.1
1,779,682	-				+1.0
1,779,682	-				+0.6
1,779,778	+		RR42_RS08430	0.25	-0.3
1,779,779	-		RR42_RS08430	0.25	-0.1
1,779,875	+		RR42_RS08430	0.41	-2.9
1,779,930	+		RR42_RS08430	0.51	+0.2
1,779,930	+		RR42_RS08430	0.51	+0.8
1,779,931	-		RR42_RS08430	0.51	-1.2
1,779,931	-		RR42_RS08430	0.51	-0.4
1,779,931	-		RR42_RS08430	0.51	-0.6
1,779,958	-		RR42_RS08430	0.56	-0.9
1,780,010	+		RR42_RS08430	0.65	-0.2
1,780,014	-		RR42_RS08430	0.65	+0.1
1,780,039	+		RR42_RS08430	0.70	-0.0
1,780,056	-		RR42_RS08430	0.73	-2.4
1,780,066	+		RR42_RS08430	0.74	+0.7
1,780,083	+		RR42_RS08430	0.77	-0.3
1,780,083	+		RR42_RS08430	0.77	+0.1
1,780,084	-		RR42_RS08430	0.77	-0.6
1,780,084	-		RR42_RS08430	0.77	-0.3
1,780,167	+				-2.6
1,780,168	-				-1.0
1,780,188	-				+2.7