Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08350

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,765,741	+		RR42_RS08345	0.23	+1.5
1,765,774	-		RR42_RS08345	0.26	+0.9
1,765,876	-		RR42_RS08345	0.35	-0.7
1,766,020	-		RR42_RS08345	0.48	+0.9
1,766,197	-		RR42_RS08345	0.63	+0.9
1,766,197	-		RR42_RS08345	0.63	+0.4
1,766,478	+		RR42_RS08345	0.88	-2.7
1,766,597	+				+0.7
1,766,657	-				+0.4
1,766,657	-				-0.1
1,766,657	-				+0.4
1,766,746	+		RR42_RS08350	0.20	-2.5
1,766,876	-		RR42_RS08350	0.39	-3.3
1,767,293	-				+0.9
1,767,377	+				+3.3
1,767,377	+				-1.4
1,767,377	+				-2.7
1,767,378	-				-0.0
1,767,378	-				-0.9
1,767,378	-				-0.3
1,767,378	-				-0.6
1,767,382	-				-0.8
1,767,382	-				-0.8
1,767,382	-				-2.7
1,767,395	+				+0.7
1,767,395	+				-1.3
1,767,396	-				-0.6
1,767,551	+		RR42_RS08355	0.25	+1.2
1,767,608	+		RR42_RS08355	0.33	-0.7
1,767,608	+		RR42_RS08355	0.33	-1.2
1,767,644	+		RR42_RS08355	0.39	-0.3
1,767,645	-		RR42_RS08355	0.39	-2.3
1,767,695	+		RR42_RS08355	0.47	-0.9
1,767,696	-		RR42_RS08355	0.47	-2.4
1,767,776	+		RR42_RS08355	0.60	+0.2
1,767,864	-		RR42_RS08355	0.73	+0.5
1,767,998	+				+1.4
1,768,168	+				-0.8
1,768,169	-				-0.4