Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08085

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,728,660	+				+0.3
1,728,660	+				+1.2
1,728,791	+		RR42_RS08080	0.15	+0.6
1,728,791	+		RR42_RS08080	0.15	+0.8
1,729,041	+		RR42_RS08080	0.43	-0.7
1,729,232	+		RR42_RS08080	0.65	-0.6
1,729,233	-		RR42_RS08080	0.65	-1.0
1,729,294	+		RR42_RS08080	0.72	+1.6
1,729,577	+				+1.0
1,730,098	+		RR42_RS08085	0.37	-1.5
1,730,098	+		RR42_RS08085	0.37	-1.5
1,730,099	-		RR42_RS08085	0.37	-1.1
1,730,536	+		RR42_RS08085	0.75	-1.2
1,730,880	+				-1.1
1,730,880	+				-0.3
1,730,907	+				+1.1
1,731,761	+				-1.7