Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07325

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,560,785	+		RR42_RS07315	0.84	-0.6
1,560,785	+		RR42_RS07315	0.84	+0.3
1,560,786	-		RR42_RS07315	0.84	-0.0
1,560,920	+				-0.4
1,560,921	-				-0.3
1,561,820	+		RR42_RS07325	0.21	-2.0
1,561,821	-		RR42_RS07325	0.21	-3.4
1,561,865	+		RR42_RS07325	0.26	-1.6
1,562,072	+		RR42_RS07325	0.52	-2.0
1,562,073	-		RR42_RS07325	0.53	-1.7
1,562,073	-		RR42_RS07325	0.53	-1.2
1,562,141	+		RR42_RS07325	0.61	+0.0
1,562,142	-		RR42_RS07325	0.61	-2.7
1,562,187	+		RR42_RS07325	0.67	-1.3
1,562,252	+		RR42_RS07325	0.75	-2.6
1,562,253	-		RR42_RS07325	0.75	-2.4
1,562,313	-		RR42_RS07325	0.83	-3.6
1,562,365	-		RR42_RS07325	0.89	-4.4
1,562,408	-				-3.0
1,562,452	+				-0.1
1,562,461	-				+0.1
1,562,468	+				+0.5
1,562,469	-				-0.1
1,562,511	-				-0.4
1,562,511	-				-2.2
1,562,531	-				+0.5
1,562,658	+				+0.1
1,562,658	+				-0.4
1,562,658	+				-2.0
1,562,658	+				-0.9
1,562,659	-				-1.6
1,562,659	-				-0.2
1,562,659	-				-3.2
1,562,807	+		RR42_RS07330	0.25	-1.1
1,562,807	+		RR42_RS07330	0.25	+0.4
1,562,843	+		RR42_RS07330	0.30	-0.3
1,562,844	-		RR42_RS07330	0.30	-2.1
1,562,844	-		RR42_RS07330	0.30	-0.7
1,562,844	-		RR42_RS07330	0.30	-1.3
1,562,882	+		RR42_RS07330	0.35	-0.2
1,562,882	+		RR42_RS07330	0.35	-2.3
1,562,909	+		RR42_RS07330	0.39	-0.6
1,562,910	-		RR42_RS07330	0.39	-0.9
1,562,946	+		RR42_RS07330	0.44	-2.9
1,563,299	+				-2.3
1,563,299	+				-2.2
1,563,299	+				-1.6
1,563,317	+				-0.9
1,563,338	+				-1.5
1,563,338	+				-3.4
1,563,339	-				-1.9