Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07275

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,550,847	-				+1.7
1,550,915	+				-0.1
1,550,966	+				+0.2
1,550,967	-				-0.2
1,550,969	+				-3.5
1,550,970	-				+1.1
1,550,970	-				-1.3
1,550,970	-				+0.4
1,551,184	+				-0.2
1,551,184	+				+1.2
1,551,185	-				+0.5
1,551,188	+				-3.0
1,551,189	-				-1.0
1,551,189	-				-1.2
1,551,189	-				+0.7
1,551,193	+				-0.2
1,551,193	+				-0.0
1,551,193	+				+1.3
1,551,193	+				-0.7
1,551,194	-				+1.3
1,551,194	-				+0.5
1,551,200	+				+1.1
1,551,200	+				-2.2
1,551,200	+				-1.1
1,551,252	+				+1.2
1,551,253	-				+0.8
1,551,314	-				+1.3
1,551,314	-				-2.0
1,551,314	-				-1.5
1,551,428	+				+0.6
1,551,428	+				-0.8
1,551,428	+				+0.8
1,551,428	+				-2.8
1,551,428	+				-0.1
1,551,428	+				+1.2
1,551,428	+				+0.3
1,551,428	+				-1.3
1,551,429	-				-0.1
1,551,429	-				+0.8
1,551,429	-				-1.5
1,551,429	-				+0.2
1,551,429	-				-1.7
1,551,435	+				+1.3
1,551,435	+				-0.4
1,551,436	-				-2.6
1,551,446	+				-0.3
1,551,447	-				+0.8
1,551,805	+		RR42_RS07275	0.25	+0.7
1,551,932	+		RR42_RS07275	0.33	+1.0
1,551,966	+		RR42_RS07275	0.35	-0.1
1,551,966	+		RR42_RS07275	0.35	-0.2
1,551,966	+		RR42_RS07275	0.35	+0.1
1,551,966	+		RR42_RS07275	0.35	+0.1
1,551,967	-		RR42_RS07275	0.35	+0.8
1,551,967	-		RR42_RS07275	0.35	+1.0
1,551,998	+		RR42_RS07275	0.37	+2.2
1,551,999	-		RR42_RS07275	0.37	-1.1
1,552,041	-		RR42_RS07275	0.40	-0.0
1,552,094	+		RR42_RS07275	0.44	+1.8
1,552,094	+		RR42_RS07275	0.44	-0.4
1,552,287	+		RR42_RS07275	0.56	-0.7
1,552,287	+		RR42_RS07275	0.56	+1.4
1,552,288	-		RR42_RS07275	0.57	-3.5
1,552,384	-		RR42_RS07275	0.63	-0.7
1,552,414	-		RR42_RS07275	0.65	-1.4
1,552,514	+		RR42_RS07275	0.71	-1.6
1,552,515	-		RR42_RS07275	0.71	+0.1
1,552,518	+		RR42_RS07275	0.72	+0.6
1,552,519	-		RR42_RS07275	0.72	-0.3
1,552,519	-		RR42_RS07275	0.72	-0.9
1,552,519	-		RR42_RS07275	0.72	-0.5
1,552,519	-		RR42_RS07275	0.72	-2.5
1,552,519	-		RR42_RS07275	0.72	-0.3
1,552,797	+				-1.7
1,552,798	-				+0.1
1,552,798	-				+0.1
1,552,818	+				+0.4
1,552,818	+				-2.5
1,552,818	+				+0.3
1,552,819	-				-0.0
1,552,819	-				-1.6
1,552,850	+				+3.2
1,552,962	+				+0.6
1,552,962	+				+0.7
1,553,007	+				-0.3
1,553,008	-				+0.4
1,553,051	+				-1.0
1,553,051	+				-0.5
1,553,052	-				-1.1
1,553,052	-				+0.6
1,553,113	-				-1.7
1,553,137	+				-1.7
1,553,137	+				-1.6
1,553,137	+				-1.2
1,553,138	-				-0.0
1,553,138	-				-0.1
1,553,138	-				-1.2
1,553,343	-				+0.4
1,553,344	+				-2.3
1,553,344	+				+0.4
1,553,345	-				+1.3
1,553,345	-				+1.5
1,553,381	-		RR42_RS07280	0.17	+1.5
1,553,416	+		RR42_RS07280	0.26	+1.7
1,553,452	+		RR42_RS07280	0.35	-2.6
1,553,524	+		RR42_RS07280	0.54	-0.4
1,553,580	-		RR42_RS07280	0.69	-0.5
1,553,580	-		RR42_RS07280	0.69	-0.2
1,553,614	+		RR42_RS07280	0.78	-0.1
1,553,614	+		RR42_RS07280	0.78	+0.1
1,553,614	+		RR42_RS07280	0.78	-0.2
1,553,615	-		RR42_RS07280	0.78	-0.8
1,553,615	-		RR42_RS07280	0.78	+1.1
1,553,716	-				-0.7
1,553,716	-				+0.3
1,553,794	-				-0.6
1,553,821	-				-0.8
1,553,838	+				+0.3
1,553,838	+				-0.1
1,553,838	+				+1.2
1,553,838	+				-2.7
1,553,839	-				-0.7
1,553,851	-				-0.5
1,553,910	+				-0.5
1,553,910	+				-0.9
1,553,910	+				+1.9
1,553,910	+				-1.2
1,553,910	+				+0.0
1,553,910	+				+1.3
1,553,911	-				-1.9