Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07265

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,544,834	+				-0.2
1,544,834	+				-0.2
1,544,834	+				-1.1
1,544,834	+				-0.3
1,544,834	+				-0.1
1,544,835	-				+0.3
1,544,835	-				+0.0
1,544,894	-		RR42_RS07255	0.13	+0.4
1,544,894	-		RR42_RS07255	0.13	+0.8
1,545,097	+				-1.9
1,545,134	-				+0.4
1,545,175	+				-0.2
1,545,175	+				-0.9
1,545,175	+				-1.2
1,545,175	+				+1.8
1,545,176	-				+0.9
1,545,176	-				-1.0
1,545,176	-				+0.4
1,545,407	+		RR42_RS07260	0.54	-1.7
1,545,407	+		RR42_RS07260	0.54	-1.2
1,545,407	+		RR42_RS07260	0.54	-1.3
1,545,407	+		RR42_RS07260	0.54	-0.8
1,545,407	+		RR42_RS07260	0.54	+1.2
1,545,408	-		RR42_RS07260	0.54	+2.4
1,545,408	-		RR42_RS07260	0.54	-2.2
1,545,420	-		RR42_RS07260	0.57	-0.5
1,545,575	+				+0.8
1,545,576	-				+0.8
1,545,598	+				-1.4
1,545,637	+				-0.3
1,545,638	-				-0.4
1,545,638	-				+0.1
1,545,638	-				-2.0
1,545,638	-				-0.7
1,545,679	+				-0.2
1,545,679	+				-1.2
1,545,680	-				-0.9
1,545,878	+		RR42_RS07265	0.36	-0.8
1,545,878	+		RR42_RS07265	0.36	-1.1
1,546,057	+				-2.0
1,546,057	+				-0.2
1,546,058	-				-0.9
1,546,107	+				-0.0
1,546,108	-				+0.8
1,546,202	-				-0.3
1,546,513	-				-1.6
1,546,513	-				-2.4
1,546,727	-		RR42_RS07270	0.11	-0.4