Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07010

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,504,771	+				-3.7
1,504,771	+				-1.8
1,504,771	+				-1.0
1,504,771	+				-1.1
1,504,772	-				-0.6
1,504,772	-				+0.2
1,504,772	-				-0.5
1,504,782	-				-0.6
1,504,820	+				+1.6
1,504,820	+				-2.5
1,504,820	+				-0.5
1,504,821	-				-1.3
1,504,940	-				+0.1
1,505,074	+				-2.7
1,505,074	+				+0.5
1,505,074	+				-0.4
1,505,074	+				+0.5
1,505,075	-				+0.3
1,505,138	-				+0.1
1,505,208	+		RR42_RS07005	0.20	-1.8
1,505,208	+		RR42_RS07005	0.20	-1.7
1,505,209	-		RR42_RS07005	0.21	+0.1
1,505,209	-		RR42_RS07005	0.21	+0.3
1,505,209	-		RR42_RS07005	0.21	-1.7
1,505,209	-		RR42_RS07005	0.21	-0.3
1,505,304	+		RR42_RS07005	0.35	+0.3
1,505,305	-		RR42_RS07005	0.35	+1.6
1,505,305	-		RR42_RS07005	0.35	+0.1
1,505,413	+		RR42_RS07005	0.52	+0.1
1,505,413	+		RR42_RS07005	0.52	-0.3
1,505,414	-		RR42_RS07005	0.52	+0.1
1,505,414	-		RR42_RS07005	0.52	-1.1
1,505,425	+		RR42_RS07005	0.53	-1.6
1,505,425	+		RR42_RS07005	0.53	-2.0
1,505,425	+		RR42_RS07005	0.53	+0.4
1,505,425	+		RR42_RS07005	0.53	-0.7
1,505,426	-		RR42_RS07005	0.53	-1.3
1,505,426	-		RR42_RS07005	0.53	+0.7
1,505,426	-		RR42_RS07005	0.53	-0.8
1,505,426	-		RR42_RS07005	0.53	+1.3
1,505,633	-		RR42_RS07005	0.85	+1.1
1,505,684	-				-0.2
1,505,719	+				+0.4
1,505,719	+				-1.4
1,505,719	+				-2.3
1,505,719	+				-1.6
1,505,719	+				-2.0
1,505,720	-				-0.3
1,505,720	-				+1.3
1,505,720	-				-0.4
1,505,720	-				-2.0
1,505,720	-				-1.2
1,505,723	+				-0.6
1,505,724	-				+0.4
1,505,724	-				-0.3
1,505,724	-				-1.0
1,505,736	+				-0.7
1,505,752	+				-0.4
1,505,753	-				-1.9
1,505,764	-				-0.6
1,505,895	+		RR42_RS07010	0.48	+1.8
1,505,896	-		RR42_RS07010	0.48	+0.9
1,505,896	-		RR42_RS07010	0.48	+0.5
1,505,896	-		RR42_RS07010	0.48	-0.7
1,505,991	+		RR42_RS07010	0.76	-2.1
1,505,992	-		RR42_RS07010	0.76	-0.7
1,505,992	-		RR42_RS07010	0.76	+0.1
1,506,027	+		RR42_RS07010	0.87	+1.4
1,506,028	-		RR42_RS07010	0.87	-1.3
1,506,033	+		RR42_RS07010	0.89	-2.3
1,506,034	-		RR42_RS07010	0.89	-1.2
1,506,211	+		RR42_RS07015	0.44	+1.0
1,506,212	-		RR42_RS07015	0.44	-3.7
1,506,212	-		RR42_RS07015	0.44	+0.3
1,506,212	-		RR42_RS07015	0.44	+0.4
1,506,322	-		RR42_RS07015	0.79	-1.7
1,506,322	-		RR42_RS07015	0.79	+0.7
1,506,347	+		RR42_RS07015	0.88	+1.2
1,506,375	+				+0.5
1,506,376	-				-0.0
1,506,376	-				-1.0
1,506,403	-				-0.4
1,506,623	+				-0.4
1,506,623	+				-0.5
1,506,844	-		RR42_RS07020	0.44	-2.7
1,506,935	+		RR42_RS07020	0.60	+0.3
1,506,992	+		RR42_RS07020	0.70	-1.8
1,507,004	+		RR42_RS07020	0.72	+1.2
1,507,005	-		RR42_RS07020	0.73	+1.1
1,507,022	+		RR42_RS07020	0.76	+0.6
1,507,022	+		RR42_RS07020	0.76	-0.0
1,507,023	-		RR42_RS07020	0.76	-0.7
1,507,023	-		RR42_RS07020	0.76	-0.5
1,507,040	+		RR42_RS07020	0.79	-1.5
1,507,070	-		RR42_RS07020	0.84	-1.5
1,507,070	-		RR42_RS07020	0.84	+0.2
1,507,070	-		RR42_RS07020	0.84	-1.8