Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06715

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,458,078	+				-1.0
1,458,079	-				-2.1
1,458,110	-				-1.5
1,458,481	+				-0.7
1,458,481	+				+0.4
1,458,482	-				-1.0
1,458,482	-				-1.9
1,458,586	+				-0.2
1,458,587	-				-0.0
1,458,601	+				+0.5
1,458,606	+				+0.2
1,458,606	+				-2.3
1,458,606	+				+0.5
1,458,606	+				-0.2
1,458,606	+				+0.3
1,458,607	-				-0.6
1,458,607	-				+1.7
1,458,752	+		RR42_RS06705	0.68	-0.1
1,458,821	+				-0.3
1,458,822	-				-0.3
1,458,828	+				-1.1
1,458,828	+				-0.5
1,458,829	-				+2.1
1,458,829	-				+0.0
1,458,829	-				-1.6
1,458,829	-				-1.5
1,458,829	-				-2.6
1,458,829	-				+0.2
1,458,832	+				+1.0
1,458,955	-		RR42_RS06710	0.59	+0.6
1,459,179	-		RR42_RS06715	0.11	-1.1
1,459,188	+		RR42_RS06715	0.12	+0.2
1,459,189	-		RR42_RS06715	0.12	-0.8
1,459,270	-		RR42_RS06715	0.19	-3.0
1,459,459	-		RR42_RS06715	0.35	-1.1
1,459,533	-		RR42_RS06715	0.41	+0.9
1,459,533	-		RR42_RS06715	0.41	-0.6
1,459,533	-		RR42_RS06715	0.41	-0.6
1,459,632	+		RR42_RS06715	0.50	+0.1
1,459,632	+		RR42_RS06715	0.50	-0.1
1,459,655	-		RR42_RS06715	0.52	-0.8
1,459,655	-		RR42_RS06715	0.52	-0.4
1,459,655	-		RR42_RS06715	0.52	-0.8
1,460,062	-		RR42_RS06715	0.86	-0.1
1,460,062	-		RR42_RS06715	0.86	+0.1
1,460,115	+				+0.9
1,460,116	-				-0.1
1,460,119	+				+0.8
1,460,119	+				+0.4
1,460,119	+				+0.3
1,460,129	+				-0.4
1,460,271	-		RR42_RS06720	0.20	-0.2
1,460,291	-		RR42_RS06720	0.28	+0.0
1,460,357	-		RR42_RS06720	0.52	-1.5
1,460,403	+		RR42_RS06720	0.70	+0.6
1,460,403	+		RR42_RS06720	0.70	-0.3
1,460,403	+		RR42_RS06720	0.70	+1.0
1,460,404	-		RR42_RS06720	0.70	-0.6
1,460,477	+				+1.1
1,460,780	-				-0.7
1,460,806	+				-1.9
1,460,883	+				+0.3
1,460,883	+				+0.1
1,460,884	-				+0.9
1,460,884	-				-0.7
1,460,884	-				-1.5
1,461,001	-		RR42_RS06725	0.14	+0.8
1,461,001	-		RR42_RS06725	0.14	+0.1
1,461,083	-		RR42_RS06725	0.27	-1.8
1,461,196	-		RR42_RS06725	0.44	+0.4