Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06530

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,428,071	+				+0.1
1,428,176	+				-1.7
1,428,344	-				-0.2
1,428,344	-				+0.5
1,428,544	+		RR42_RS06525	0.17	-0.1
1,428,545	-		RR42_RS06525	0.17	-0.5
1,428,628	-		RR42_RS06525	0.31	-1.5
1,428,628	-		RR42_RS06525	0.31	-2.4
1,428,864	+		RR42_RS06525	0.69	-2.8
1,428,864	+		RR42_RS06525	0.69	-0.6
1,428,865	-		RR42_RS06525	0.70	+0.9
1,428,865	-		RR42_RS06525	0.70	-0.4
1,428,865	-		RR42_RS06525	0.70	-1.2
1,428,865	-		RR42_RS06525	0.70	+0.0
1,428,913	-		RR42_RS06525	0.78	-1.7
1,428,967	+		RR42_RS06525	0.86	-0.9
1,429,223	+		RR42_RS06530	0.14	-0.5
1,429,223	+		RR42_RS06530	0.14	-1.9
1,429,224	-		RR42_RS06530	0.14	+0.1
1,429,224	-		RR42_RS06530	0.14	-1.4
1,429,224	-		RR42_RS06530	0.14	-1.6
1,429,224	-		RR42_RS06530	0.14	-0.3
1,429,538	+		RR42_RS06530	0.38	+0.4
1,429,538	+		RR42_RS06530	0.38	+0.1
1,429,538	+		RR42_RS06530	0.38	+0.2
1,429,539	-		RR42_RS06530	0.38	-0.1
1,429,539	-		RR42_RS06530	0.38	+0.3
1,429,539	-		RR42_RS06530	0.38	+0.5
1,429,539	-		RR42_RS06530	0.38	+1.6
1,429,540	+		RR42_RS06530	0.38	-0.8
1,429,540	+		RR42_RS06530	0.38	+0.4
1,429,540	+		RR42_RS06530	0.38	-0.1
1,429,657	+		RR42_RS06530	0.47	-1.0
1,429,658	-		RR42_RS06530	0.47	+0.4
1,429,658	-		RR42_RS06530	0.47	-0.1
1,429,658	-		RR42_RS06530	0.47	+1.4
1,429,808	+		RR42_RS06530	0.58	+1.5
1,429,809	-		RR42_RS06530	0.58	-1.0
1,429,836	-		RR42_RS06530	0.61	-0.1
1,430,336	+				-0.1
1,430,336	+				-0.7
1,430,337	-				+1.8
1,430,362	+				-0.4
1,430,383	+				+1.5
1,430,455	+				+2.9
1,430,455	+				-0.1
1,430,455	+				+2.5
1,430,456	-				-0.2
1,430,504	+				-0.1
1,430,505	-				+1.5
1,430,505	-				+1.0
1,430,505	-				+1.3
1,430,777	+		RR42_RS06535	0.35	+0.7
1,430,777	+		RR42_RS06535	0.35	-0.1
1,430,778	-		RR42_RS06535	0.35	-0.8
1,430,778	-		RR42_RS06535	0.35	+0.2
1,430,778	-		RR42_RS06535	0.35	-1.0
1,430,966	+		RR42_RS06535	0.53	+0.0
1,430,967	-		RR42_RS06535	0.53	-1.7
1,430,968	+		RR42_RS06535	0.53	+0.5
1,431,098	+		RR42_RS06535	0.66	-0.6
1,431,098	+		RR42_RS06535	0.66	-1.5
1,431,099	-		RR42_RS06535	0.66	+0.6
1,431,116	+		RR42_RS06535	0.68	-1.1
1,431,116	+		RR42_RS06535	0.68	-0.4
1,431,117	-		RR42_RS06535	0.68	-0.6
1,431,117	-		RR42_RS06535	0.68	-0.2
1,431,134	+		RR42_RS06535	0.69	+1.4
1,431,134	+		RR42_RS06535	0.69	-1.1
1,431,135	-		RR42_RS06535	0.69	-0.7
1,431,135	-		RR42_RS06535	0.69	+0.2
1,431,135	-		RR42_RS06535	0.69	-0.4
1,431,299	-		RR42_RS06535	0.85	+0.5