Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04740

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,054,482	-		RR42_RS04735	0.66	-0.8
1,054,699	-				-1.7
1,054,830	-				-0.2
1,054,830	-				-0.9
1,054,830	-				-1.1
1,054,830	-				+0.1
1,054,830	-				-0.6
1,054,863	-				+1.8
1,054,863	-				+0.0
1,054,880	-				+2.0
1,055,461	+		RR42_RS04740	0.31	-0.6
1,055,461	+		RR42_RS04740	0.31	+1.0
1,055,461	+		RR42_RS04740	0.31	+1.0
1,055,461	+		RR42_RS04740	0.31	+0.5
1,055,462	-		RR42_RS04740	0.31	-1.4
1,055,497	+		RR42_RS04740	0.33	+0.6
1,055,684	-		RR42_RS04740	0.45	+2.6
1,055,684	-		RR42_RS04740	0.45	-1.5
1,055,816	+		RR42_RS04740	0.54	-0.7
1,055,873	-		RR42_RS04740	0.57	+0.6
1,056,202	+		RR42_RS04740	0.79	-0.2
1,056,202	+		RR42_RS04740	0.79	+0.4
1,056,203	-		RR42_RS04740	0.79	-2.3
1,056,203	-		RR42_RS04740	0.79	-0.4
1,056,203	-		RR42_RS04740	0.79	-0.6
1,056,203	-		RR42_RS04740	0.79	+0.3
1,056,203	-		RR42_RS04740	0.79	-2.1
1,056,203	-		RR42_RS04740	0.79	-2.8
1,056,203	-		RR42_RS04740	0.79	-1.3
1,056,461	+				-0.3
1,056,532	+				+1.6
1,056,532	+				+0.4
1,056,533	-				-2.1
1,056,533	-				-0.7
1,056,533	-				-0.6
1,056,552	+				-0.1
1,056,553	-				-0.1
1,056,868	+				+1.6
1,056,869	-				+1.0
1,056,927	+				-1.3
1,056,967	+				-0.3
1,057,028	+				+2.8
1,057,028	+				+1.6
1,057,028	+				-0.3
1,057,028	+				+0.3
1,057,028	+				+1.2
1,057,028	+				-0.8
1,057,028	+				-0.2
1,057,028	+				+1.1
1,057,029	-				-0.0
1,057,029	-				+0.7
1,057,029	-				+0.6
1,057,099	+		RR42_RS04745	0.19	-1.0
1,057,123	+		RR42_RS04745	0.23	-0.1
1,057,123	+		RR42_RS04745	0.23	-1.8
1,057,123	+		RR42_RS04745	0.23	+0.1
1,057,123	+		RR42_RS04745	0.23	+0.2
1,057,123	+		RR42_RS04745	0.23	-0.8
1,057,124	-		RR42_RS04745	0.23	+1.8
1,057,140	+		RR42_RS04745	0.26	-0.4
1,057,141	-		RR42_RS04745	0.26	+0.7
1,057,199	+		RR42_RS04745	0.35	+0.2
1,057,200	-		RR42_RS04745	0.35	+0.1
1,057,230	+		RR42_RS04745	0.39	+0.0
1,057,231	-		RR42_RS04745	0.40	+0.6
1,057,231	-		RR42_RS04745	0.40	-0.2
1,057,268	+		RR42_RS04745	0.45	-2.0
1,057,268	+		RR42_RS04745	0.45	+1.0
1,057,269	-		RR42_RS04745	0.45	+0.4
1,057,269	-		RR42_RS04745	0.45	-0.5
1,057,309	-		RR42_RS04745	0.52	-1.0
1,057,309	-		RR42_RS04745	0.52	-2.1
1,057,309	-		RR42_RS04745	0.52	-1.7
1,057,309	-		RR42_RS04745	0.52	-0.1
1,057,482	-		RR42_RS04745	0.78	-1.3