Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04000

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
886,369	-		RR42_RS03995	0.90	-1.6
886,633	-				+2.0
886,656	+				-1.1
886,656	+				-0.9
886,801	-				+0.7
886,801	-				-1.1
886,811	+				-0.5
886,811	+				+0.1
886,811	+				-1.9
886,812	-				-1.4
886,812	-				+0.8
886,814	-				-2.3
886,844	-				+0.3
886,981	+				+0.4
886,982	-				-0.1
886,999	-				+0.2
887,211	+				-1.7
887,211	+				-1.2
887,212	-				+0.6
887,227	+				+0.8
887,363	+				-0.4
887,363	+				+0.7
887,363	+				-1.7
887,363	+				+0.2
887,363	+				+0.6
887,363	+				+0.8
887,364	-				+0.1
887,364	-				+1.0
887,367	+				-1.6
887,761	+		RR42_RS04000	0.89	+0.4
887,761	+		RR42_RS04000	0.89	+1.1
887,762	-		RR42_RS04000	0.89	-0.2
887,836	+				-3.0
887,837	-				+1.1
888,099	+		RR42_RS04005	0.12	-1.6
888,184	+		RR42_RS04005	0.16	+0.1
888,185	-		RR42_RS04005	0.16	+0.7
888,185	-		RR42_RS04005	0.16	+0.1
888,185	-		RR42_RS04005	0.16	+0.7
888,697	+		RR42_RS04005	0.39	+0.5
888,698	-		RR42_RS04005	0.39	-0.1