Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS02270
Experiment: R2A with D-Cycloserine 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with D-Cycloserine 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
507,955 | - | +1.2 | |||
507,997 | + | +0.6 | |||
508,126 | + | +0.8 | |||
508,126 | + | +1.0 | |||
508,127 | - | -0.7 | |||
508,127 | - | -1.8 | |||
508,871 | - | RR42_RS02270 | 0.64 | -1.3 | |
509,033 | + | -0.2 | |||
509,075 | + | +0.0 | |||
509,076 | - | -0.3 | |||
509,305 | - | RR42_RS02275 | 0.18 | -0.0 | |
509,305 | - | RR42_RS02275 | 0.18 | -1.4 | |
509,606 | + | RR42_RS02275 | 0.43 | +1.2 | |
509,606 | + | RR42_RS02275 | 0.43 | +1.4 | |
509,607 | - | RR42_RS02275 | 0.43 | +0.3 | |
509,730 | + | RR42_RS02275 | 0.53 | -0.3 | |
509,731 | - | RR42_RS02275 | 0.53 | -2.5 | |
509,731 | - | RR42_RS02275 | 0.53 | +1.9 | |
509,742 | + | RR42_RS02275 | 0.54 | -2.5 | |
509,743 | - | RR42_RS02275 | 0.54 | -1.3 | |
509,743 | - | RR42_RS02275 | 0.54 | -1.6 | |
509,917 | - | RR42_RS02275 | 0.69 | +0.5 | |
509,917 | - | RR42_RS02275 | 0.69 | +0.2 |
Or see this region's nucleotide sequence