Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS02070

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
460,050	-		RR42_RS02060	0.69	-1.1
460,050	-		RR42_RS02060	0.69	+0.7
460,071	+		RR42_RS02060	0.71	-0.6
460,072	-		RR42_RS02060	0.71	-0.0
460,209	-		RR42_RS02060	0.86	-0.6
460,209	-		RR42_RS02060	0.86	-1.1
460,209	-		RR42_RS02060	0.86	+1.2
460,260	-				-2.3
460,276	+				-3.1
460,276	+				+0.0
460,277	-				-1.5
460,277	-				-1.2
460,277	-				-2.1
460,277	-				-0.8
460,320	+				+0.9
460,320	+				+0.9
460,320	+				-0.1
460,321	-				+1.7
460,321	-				-0.3
460,321	-				-1.1
460,321	-				+1.8
460,324	+				-1.8
460,325	-				+0.8
460,325	-				-0.4
460,325	-				+1.0
460,325	-				-1.5
460,325	-				+0.4
460,325	-				-0.8
460,325	-				-0.6
460,325	-				-0.8
460,335	+				-0.0
460,335	+				-0.3
460,349	+				-0.3
460,349	+				+1.3
460,350	-				-2.8
460,391	-				+0.5
460,423	+				+0.3
460,451	+				-0.8
460,456	+				+0.2
460,456	+				-2.3
460,456	+				+0.4
460,456	+				-0.6
460,456	+				-2.1
460,457	-				-0.1
460,457	-				-0.4
460,577	+		RR42_RS02065	0.38	-1.9
460,578	-		RR42_RS02065	0.38	-1.0
460,858	+				-0.1
460,859	-				+0.7
460,915	+				+0.8
460,915	+				+0.7
460,915	+				-2.6
460,916	-				+0.5
460,916	-				+0.4
460,916	-				+0.4
460,916	-				-0.5
460,972	-				-1.1
460,972	-				-3.0
460,972	-				+0.7
460,972	-				-0.6
460,972	-				-1.6
462,454	-				+2.9
462,454	-				+2.4
462,568	-				-1.9
462,568	-				+0.0
462,569	+				+1.0
462,569	+				+2.2
462,570	-				-0.1
462,570	-				-2.1
462,570	-				+0.0
462,570	-				+1.7
462,570	-				-3.3
462,570	-				-1.4
462,570	-				+2.0
462,570	-				-1.9
462,570	-				-3.1
462,603	+				+1.9
462,604	-				-1.2
462,657	+				+1.6
462,657	+				+2.1
462,657	+				-1.6
462,657	+				-0.9
462,657	+				-0.8
462,658	-				+0.2
462,658	-				-0.9
462,658	-				-1.8
462,658	-				+0.6
462,658	-				-0.4
462,661	+				+0.4
462,662	-				+0.4
462,662	-				-1.6
462,662	-				+0.9
462,662	-				-1.1
462,662	-				-0.0
462,673	+				+0.8
462,673	+				+1.1
462,674	-				+0.5
462,674	-				-0.9
462,674	-				-0.8
462,682	-				+0.4
462,682	-				+0.0
462,682	-				+0.2
462,682	-				-2.8
462,682	-				+0.4
462,685	+				-0.8
462,686	-				-0.7
462,686	-				-1.8
462,686	-				+1.2
462,686	-				-0.4
462,722	-				-0.2
462,722	-				-2.3
462,722	-				-0.0
462,797	-				-0.2
462,849	-				+1.7
462,849	-				-2.7