Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS00425

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
111,227	-		RR42_RS00415	0.72	+0.4
111,227	-		RR42_RS00415	0.72	+0.8
111,262	+		RR42_RS00415	0.76	+3.4
111,262	+		RR42_RS00415	0.76	-1.5
111,262	+		RR42_RS00415	0.76	+0.6
111,263	-		RR42_RS00415	0.76	-0.4
111,263	-		RR42_RS00415	0.76	+0.4
111,263	-		RR42_RS00415	0.76	+0.4
111,362	+		RR42_RS00415	0.88	-2.3
111,363	-		RR42_RS00415	0.88	-0.2
111,496	-				+0.8
111,616	+				-0.6
111,616	+				-1.6
111,796	+		RR42_RS00420	0.69	-0.2
111,797	-		RR42_RS00420	0.70	-1.0
111,797	-		RR42_RS00420	0.70	-1.2
111,807	+		RR42_RS00420	0.73	+1.0
111,807	+		RR42_RS00420	0.73	+0.9
111,808	-		RR42_RS00420	0.74	-0.1
111,883	-				-1.3
112,129	-		RR42_RS00425	0.12	-0.3
112,374	+		RR42_RS00425	0.36	-1.2
112,375	-		RR42_RS00425	0.36	+1.4
112,375	-		RR42_RS00425	0.36	-0.2
112,375	-		RR42_RS00425	0.36	-0.0
112,375	-		RR42_RS00425	0.36	-2.9
112,599	+		RR42_RS00425	0.58	-3.6
113,082	+				-1.6
113,082	+				-1.8
113,082	+				+0.7
113,082	+				-2.8
113,082	+				-1.0
113,083	-				+0.8
113,083	-				+0.4
113,083	-				+0.3
113,332	-		RR42_RS00430	0.42	+0.8
113,601	+		RR42_RS00430	0.81	-0.1
113,602	-		RR42_RS00430	0.81	+0.4
113,773	-				-2.3
113,862	+				-0.6
113,863	-				-2.2
113,863	-				-1.5
113,917	+				+1.4
113,966	+				-0.2
113,966	+				-2.4
113,966	+				+0.4