Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5085

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
5,865,275	+		Pf6N2E2_5084	0.44	+1.5
5,865,275	+		Pf6N2E2_5084	0.44	+1.0
5,865,275	+		Pf6N2E2_5084	0.44	+1.0
5,865,479	+		Pf6N2E2_5084	0.56	+0.7
5,865,479	+		Pf6N2E2_5084	0.56	+1.2
5,865,480	-		Pf6N2E2_5084	0.56	+1.1
5,865,480	-		Pf6N2E2_5084	0.56	+0.9
5,865,480	-		Pf6N2E2_5084	0.56	+1.5
5,865,480	-		Pf6N2E2_5084	0.56	+1.8
5,865,480	-		Pf6N2E2_5084	0.56	+1.3
5,865,480	-		Pf6N2E2_5084	0.56	+1.1
5,865,542	+		Pf6N2E2_5084	0.60	+1.3
5,865,629	-		Pf6N2E2_5084	0.65	+2.7
5,865,804	-		Pf6N2E2_5084	0.76	+1.9
5,865,804	-		Pf6N2E2_5084	0.76	+1.1
5,865,824	+		Pf6N2E2_5084	0.77	+0.9
5,865,824	+		Pf6N2E2_5084	0.77	+1.3
5,865,824	+		Pf6N2E2_5084	0.77	+1.0
5,865,824	+		Pf6N2E2_5084	0.77	+1.3
5,865,824	+		Pf6N2E2_5084	0.77	+2.4
5,865,824	+		Pf6N2E2_5084	0.77	+0.4
5,865,824	+		Pf6N2E2_5084	0.77	+3.1
5,865,824	+		Pf6N2E2_5084	0.77	+0.3
5,865,824	+		Pf6N2E2_5084	0.77	+1.5
5,865,825	-		Pf6N2E2_5084	0.77	+1.5
5,865,825	-		Pf6N2E2_5084	0.77	+0.9
5,865,825	-		Pf6N2E2_5084	0.77	+1.5
5,865,825	-		Pf6N2E2_5084	0.77	+1.8
5,865,825	-		Pf6N2E2_5084	0.77	+1.1
5,865,825	-		Pf6N2E2_5084	0.77	+0.7
5,865,825	-		Pf6N2E2_5084	0.77	+1.7
5,865,825	-		Pf6N2E2_5084	0.77	+1.9
5,865,825	-		Pf6N2E2_5084	0.77	+1.9
5,866,085	+				+0.9
5,866,085	+				+1.4
5,866,086	-				+1.5
5,866,086	-				+1.7
5,866,124	+				+0.7
5,866,124	+				+2.1
5,866,124	+				-0.0
5,866,125	-				+1.3
5,866,125	-				+1.9
5,866,125	-				+1.2
5,866,125	-				+0.8
5,866,133	+				+1.4
5,866,133	+				+0.4
5,866,189	-				+0.0
5,866,322	+				+1.4
5,866,323	-				+0.7
5,866,323	-				+1.1
5,866,323	-				-0.4
5,866,529	+				+0.6
5,866,529	+				+0.7
5,866,530	-				-0.1
5,866,530	-				-1.5
5,866,576	+		Pf6N2E2_5085	0.10	-1.3
5,866,576	+		Pf6N2E2_5085	0.10	-0.1
5,866,576	+		Pf6N2E2_5085	0.10	+1.0
5,866,576	+		Pf6N2E2_5085	0.10	-0.3
5,866,577	-		Pf6N2E2_5085	0.10	+0.1
5,866,577	-		Pf6N2E2_5085	0.10	+0.6
5,866,577	-		Pf6N2E2_5085	0.10	+1.0
5,866,577	-		Pf6N2E2_5085	0.10	+0.7
5,866,577	-		Pf6N2E2_5085	0.10	-0.2
5,866,577	-		Pf6N2E2_5085	0.10	+1.3
5,866,577	-		Pf6N2E2_5085	0.10	+1.2
5,866,577	-		Pf6N2E2_5085	0.10	+0.2
5,866,577	-		Pf6N2E2_5085	0.10	-0.4
5,866,577	-		Pf6N2E2_5085	0.10	+1.2
5,866,578	+		Pf6N2E2_5085	0.10	-0.0
5,866,653	+		Pf6N2E2_5085	0.13	-0.3
5,866,653	+		Pf6N2E2_5085	0.13	+0.3
5,866,654	-		Pf6N2E2_5085	0.13	+0.3
5,866,657	+		Pf6N2E2_5085	0.13	+0.2
5,866,657	+		Pf6N2E2_5085	0.13	+1.6
5,866,657	+		Pf6N2E2_5085	0.13	+0.5
5,866,657	+		Pf6N2E2_5085	0.13	+0.4
5,866,657	+		Pf6N2E2_5085	0.13	+0.7
5,866,657	+		Pf6N2E2_5085	0.13	+0.5
5,866,657	+		Pf6N2E2_5085	0.13	-0.8
5,866,657	+		Pf6N2E2_5085	0.13	-1.5
5,866,657	+		Pf6N2E2_5085	0.13	+0.5
5,866,657	+		Pf6N2E2_5085	0.13	+1.1
5,866,657	+		Pf6N2E2_5085	0.13	+0.6
5,866,658	-		Pf6N2E2_5085	0.13	+0.3
5,866,658	-		Pf6N2E2_5085	0.13	+0.7
5,866,658	-		Pf6N2E2_5085	0.13	+0.3
5,866,658	-		Pf6N2E2_5085	0.13	+0.3
5,866,658	-		Pf6N2E2_5085	0.13	-0.0
5,866,658	-		Pf6N2E2_5085	0.13	+0.4
5,866,658	-		Pf6N2E2_5085	0.13	+0.7
5,866,658	-		Pf6N2E2_5085	0.13	+0.2
5,866,658	-		Pf6N2E2_5085	0.13	+1.0
5,866,660	-		Pf6N2E2_5085	0.13	+0.1
5,866,689	+		Pf6N2E2_5085	0.14	-1.0
5,866,689	+		Pf6N2E2_5085	0.14	+0.3
5,866,689	+		Pf6N2E2_5085	0.14	-0.9
5,866,689	+		Pf6N2E2_5085	0.14	+0.3
5,866,690	-		Pf6N2E2_5085	0.14	+0.5
5,866,690	-		Pf6N2E2_5085	0.14	+0.8
5,866,690	-		Pf6N2E2_5085	0.14	+0.5
5,866,690	-		Pf6N2E2_5085	0.14	-0.1
5,866,690	-		Pf6N2E2_5085	0.14	+0.0
5,866,690	-		Pf6N2E2_5085	0.14	+0.2
5,866,690	-		Pf6N2E2_5085	0.14	-0.3
5,866,808	+		Pf6N2E2_5085	0.18	+0.1
5,866,808	+		Pf6N2E2_5085	0.18	+0.9
5,866,809	-		Pf6N2E2_5085	0.18	+0.7
5,866,815	+		Pf6N2E2_5085	0.18	+0.5
5,866,928	+		Pf6N2E2_5085	0.22	+0.4
5,866,929	-		Pf6N2E2_5085	0.22	-0.3
5,866,984	+		Pf6N2E2_5085	0.23	-0.0
5,866,987	-		Pf6N2E2_5085	0.23	+1.4
5,867,039	+		Pf6N2E2_5085	0.25	+1.4
5,867,039	+		Pf6N2E2_5085	0.25	+1.5
5,867,138	+		Pf6N2E2_5085	0.28	+1.1
5,867,138	+		Pf6N2E2_5085	0.28	-0.4
5,867,138	+		Pf6N2E2_5085	0.28	+0.0
5,867,139	-		Pf6N2E2_5085	0.28	-0.1
5,867,139	-		Pf6N2E2_5085	0.28	-2.3
5,867,144	+		Pf6N2E2_5085	0.29	+0.7
5,867,144	+		Pf6N2E2_5085	0.29	-0.7
5,867,145	-		Pf6N2E2_5085	0.29	+1.1
5,867,145	-		Pf6N2E2_5085	0.29	-0.0
5,867,145	-		Pf6N2E2_5085	0.29	+0.6
5,867,163	-		Pf6N2E2_5085	0.29	+0.8
5,867,280	-		Pf6N2E2_5085	0.33	+0.8
5,867,310	-		Pf6N2E2_5085	0.34	+1.1
5,867,337	-		Pf6N2E2_5085	0.35	-0.7
5,867,361	+		Pf6N2E2_5085	0.36	+0.3
5,867,380	+		Pf6N2E2_5085	0.36	-0.7
5,867,380	+		Pf6N2E2_5085	0.36	+0.3
5,867,380	+		Pf6N2E2_5085	0.36	+1.0
5,867,380	+		Pf6N2E2_5085	0.36	-1.1
5,867,380	+		Pf6N2E2_5085	0.36	+0.7
5,867,380	+		Pf6N2E2_5085	0.36	+0.0
5,867,381	-		Pf6N2E2_5085	0.36	+0.9
5,867,381	-		Pf6N2E2_5085	0.36	-0.8
5,867,381	-		Pf6N2E2_5085	0.36	+0.8
5,867,381	-		Pf6N2E2_5085	0.36	+2.8
5,867,381	-		Pf6N2E2_5085	0.36	-0.0
5,867,381	-		Pf6N2E2_5085	0.36	-0.1
5,867,381	-		Pf6N2E2_5085	0.36	-0.4
5,867,381	-		Pf6N2E2_5085	0.36	+0.3
5,867,546	-		Pf6N2E2_5085	0.42	-0.1
5,867,557	+		Pf6N2E2_5085	0.42	+0.6
5,867,557	+		Pf6N2E2_5085	0.42	+1.1
5,867,557	+		Pf6N2E2_5085	0.42	+1.1
5,867,558	-		Pf6N2E2_5085	0.42	-0.5
5,867,558	-		Pf6N2E2_5085	0.42	+0.6
5,867,558	-		Pf6N2E2_5085	0.42	+0.5
5,867,558	-		Pf6N2E2_5085	0.42	+1.7
5,867,558	-		Pf6N2E2_5085	0.42	-0.8
5,867,558	-		Pf6N2E2_5085	0.42	+0.6
5,867,588	-		Pf6N2E2_5085	0.43	+0.4
5,867,597	-		Pf6N2E2_5085	0.43	-0.4
5,867,663	+		Pf6N2E2_5085	0.45	+1.3
5,867,663	+		Pf6N2E2_5085	0.45	-0.7
5,867,664	-		Pf6N2E2_5085	0.45	+0.0
5,867,685	+		Pf6N2E2_5085	0.46	+0.2
5,867,685	+		Pf6N2E2_5085	0.46	+0.3
5,867,686	-		Pf6N2E2_5085	0.46	+0.6
5,867,719	+		Pf6N2E2_5085	0.47	-0.2
5,867,720	-		Pf6N2E2_5085	0.47	+0.7
5,867,805	+		Pf6N2E2_5085	0.50	+0.2
5,867,805	+		Pf6N2E2_5085	0.50	+0.5
5,867,814	+		Pf6N2E2_5085	0.50	+1.1
5,867,814	+		Pf6N2E2_5085	0.50	-0.7
5,867,852	+		Pf6N2E2_5085	0.51	+0.6
5,867,853	-		Pf6N2E2_5085	0.52	+0.6
5,867,952	-		Pf6N2E2_5085	0.55	+0.5
5,867,985	+		Pf6N2E2_5085	0.56	+2.0
5,867,987	+		Pf6N2E2_5085	0.56	+0.1
5,867,987	+		Pf6N2E2_5085	0.56	+0.0
5,867,987	+		Pf6N2E2_5085	0.56	+0.3
5,868,074	+		Pf6N2E2_5085	0.59	+1.0
5,868,210	+		Pf6N2E2_5085	0.63	+0.2
5,868,217	-		Pf6N2E2_5085	0.63	+0.4
5,868,324	+		Pf6N2E2_5085	0.67	-0.2
5,868,332	+		Pf6N2E2_5085	0.67	-0.0
5,868,484	-		Pf6N2E2_5085	0.72	-0.0
5,868,490	-		Pf6N2E2_5085	0.72	+0.2
5,868,540	-		Pf6N2E2_5085	0.74	+0.0
5,868,575	+		Pf6N2E2_5085	0.75	-0.0
5,868,575	+		Pf6N2E2_5085	0.75	+1.2
5,868,576	-		Pf6N2E2_5085	0.75	-0.0
5,868,576	-		Pf6N2E2_5085	0.75	-0.6
5,868,576	-		Pf6N2E2_5085	0.75	+1.2
5,868,732	+		Pf6N2E2_5085	0.80	+0.7
5,868,732	+		Pf6N2E2_5085	0.80	+1.2
5,868,732	+		Pf6N2E2_5085	0.80	+1.2
5,868,733	-		Pf6N2E2_5085	0.80	+0.2
5,868,827	-		Pf6N2E2_5085	0.83	+0.2
5,868,827	-		Pf6N2E2_5085	0.83	+1.9
5,868,879	+		Pf6N2E2_5085	0.85	-0.6
5,868,887	+		Pf6N2E2_5085	0.85	+0.1
5,868,887	+		Pf6N2E2_5085	0.85	+0.8
5,868,887	+		Pf6N2E2_5085	0.85	+0.4
5,868,888	-		Pf6N2E2_5085	0.85	+0.3
5,868,935	+		Pf6N2E2_5085	0.87	+1.1
5,868,935	+		Pf6N2E2_5085	0.87	+0.5
5,868,935	+		Pf6N2E2_5085	0.87	+0.0
5,868,936	-		Pf6N2E2_5085	0.87	+0.4
5,869,025	+		Pf6N2E2_5085	0.90	+0.2
5,869,068	+				+0.7
5,869,068	+				-0.4
5,869,131	+				-0.2
5,869,188	+				-0.6
5,869,189	-				+1.2
5,869,190	+				+0.7
5,869,190	+				+0.0
5,869,190	+				+0.7
5,869,191	-				+0.6
5,869,301	+				+0.4
5,869,308	-				-0.1
5,869,353	-				-0.3
5,869,389	+				+0.4
5,869,398	-				+0.1
5,869,398	-				-0.2
5,869,398	-				-0.3
5,869,433	+				+0.8
5,869,459	-				+0.1
5,869,669	+				+0.5
5,869,670	-				-1.3
5,869,709	+				-2.4
5,869,876	-		Pf6N2E2_5086	0.88	+0.0
5,869,992	-				+1.1
5,870,012	-				-0.1
5,870,038	-				-0.7
5,870,096	-				+0.9
5,870,096	-				+1.0