Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4238

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
4,928,711	+		Pf6N2E2_4237	0.15	-0.4
4,928,711	+		Pf6N2E2_4237	0.15	-0.2
4,928,711	+		Pf6N2E2_4237	0.15	+0.5
4,928,712	-		Pf6N2E2_4237	0.15	-0.6
4,928,816	+		Pf6N2E2_4237	0.24	+0.1
4,928,816	+		Pf6N2E2_4237	0.24	+0.4
4,928,817	-		Pf6N2E2_4237	0.25	+0.6
4,928,817	-		Pf6N2E2_4237	0.25	-0.1
4,928,819	+		Pf6N2E2_4237	0.25	+0.9
4,928,819	+		Pf6N2E2_4237	0.25	-1.1
4,928,854	+		Pf6N2E2_4237	0.28	+0.4
4,928,854	+		Pf6N2E2_4237	0.28	+0.3
4,928,855	-		Pf6N2E2_4237	0.28	-0.1
4,928,855	-		Pf6N2E2_4237	0.28	+0.1
4,928,882	+		Pf6N2E2_4237	0.30	-0.6
4,928,882	+		Pf6N2E2_4237	0.30	-0.4
4,928,965	+		Pf6N2E2_4237	0.38	+0.2
4,928,965	+		Pf6N2E2_4237	0.38	-0.2
4,928,966	-		Pf6N2E2_4237	0.38	-0.4
4,928,966	-		Pf6N2E2_4237	0.38	-1.4
4,928,992	+		Pf6N2E2_4237	0.40	+0.2
4,928,992	+		Pf6N2E2_4237	0.40	+0.5
4,928,992	+		Pf6N2E2_4237	0.40	+0.9
4,928,992	+		Pf6N2E2_4237	0.40	+1.0
4,928,993	-		Pf6N2E2_4237	0.40	-0.3
4,929,067	+		Pf6N2E2_4237	0.47	-0.1
4,929,067	+		Pf6N2E2_4237	0.47	+0.4
4,929,067	+		Pf6N2E2_4237	0.47	-0.0
4,929,067	+		Pf6N2E2_4237	0.47	-1.4
4,929,067	+		Pf6N2E2_4237	0.47	-0.4
4,929,068	-		Pf6N2E2_4237	0.47	-1.0
4,929,068	-		Pf6N2E2_4237	0.47	-0.2
4,929,068	-		Pf6N2E2_4237	0.47	-0.1
4,929,068	-		Pf6N2E2_4237	0.47	+0.6
4,929,068	-		Pf6N2E2_4237	0.47	-0.4
4,929,068	-		Pf6N2E2_4237	0.47	-0.8
4,929,068	-		Pf6N2E2_4237	0.47	+0.5
4,929,068	-		Pf6N2E2_4237	0.47	+0.5
4,929,068	-		Pf6N2E2_4237	0.47	-1.8
4,929,074	+		Pf6N2E2_4237	0.47	+0.2
4,929,075	-		Pf6N2E2_4237	0.47	+0.0
4,929,075	-		Pf6N2E2_4237	0.47	+0.1
4,929,075	-		Pf6N2E2_4237	0.47	+0.2
4,929,106	+		Pf6N2E2_4237	0.50	+0.7
4,929,106	+		Pf6N2E2_4237	0.50	-0.3
4,929,106	+		Pf6N2E2_4237	0.50	+0.2
4,929,106	+		Pf6N2E2_4237	0.50	-0.1
4,929,107	-		Pf6N2E2_4237	0.50	-0.2
4,929,107	-		Pf6N2E2_4237	0.50	+0.3
4,929,395	+		Pf6N2E2_4237	0.76	+0.6
4,929,395	+		Pf6N2E2_4237	0.76	+0.7
4,929,395	+		Pf6N2E2_4237	0.76	-0.1
4,929,395	+		Pf6N2E2_4237	0.76	+0.3
4,929,396	-		Pf6N2E2_4237	0.76	+0.4
4,929,462	-		Pf6N2E2_4237	0.82	+0.2
4,929,526	+		Pf6N2E2_4237	0.87	+0.5
4,929,527	-		Pf6N2E2_4237	0.87	+0.4
4,929,527	-		Pf6N2E2_4237	0.87	-0.1
4,929,527	-		Pf6N2E2_4237	0.87	+1.2
4,929,611	+				+0.2
4,929,611	+				+0.9
4,929,611	+				+0.8
4,929,612	-				+0.9
4,929,612	-				+0.3
4,929,612	-				+0.0
4,929,612	-				-0.1
4,929,612	-				-0.2
4,929,612	-				-1.2
4,929,612	-				-0.1
4,929,661	+				+0.3
4,929,720	+				-1.1
4,929,720	+				+0.5
4,929,721	-				-0.5
4,929,797	+		Pf6N2E2_4238	0.10	+0.7
4,929,797	+		Pf6N2E2_4238	0.10	-0.2
4,929,798	-		Pf6N2E2_4238	0.10	+1.1
4,929,853	+		Pf6N2E2_4238	0.14	+0.1
4,929,853	+		Pf6N2E2_4238	0.14	-0.6
4,929,853	+		Pf6N2E2_4238	0.14	-0.2
4,929,853	+		Pf6N2E2_4238	0.14	+0.2
4,929,854	-		Pf6N2E2_4238	0.14	-1.1
4,929,961	+		Pf6N2E2_4238	0.22	+0.5
4,929,961	+		Pf6N2E2_4238	0.22	+0.4
4,929,961	+		Pf6N2E2_4238	0.22	-0.7
4,929,961	+		Pf6N2E2_4238	0.22	-0.2
4,929,961	+		Pf6N2E2_4238	0.22	+0.2
4,929,962	-		Pf6N2E2_4238	0.22	-0.9
4,929,962	-		Pf6N2E2_4238	0.22	-0.7
4,929,962	-		Pf6N2E2_4238	0.22	+0.9
4,929,962	-		Pf6N2E2_4238	0.22	+1.1
4,930,039	-		Pf6N2E2_4238	0.28	+0.3
4,930,039	-		Pf6N2E2_4238	0.28	+0.2
4,930,039	-		Pf6N2E2_4238	0.28	-0.8
4,930,039	-		Pf6N2E2_4238	0.28	-1.0
4,930,046	+		Pf6N2E2_4238	0.28	-1.4
4,930,070	+		Pf6N2E2_4238	0.30	-0.7
4,930,071	-		Pf6N2E2_4238	0.30	-0.6
4,930,071	-		Pf6N2E2_4238	0.30	-0.5
4,930,071	-		Pf6N2E2_4238	0.30	-1.1
4,930,071	-		Pf6N2E2_4238	0.30	-1.2
4,930,172	-		Pf6N2E2_4238	0.37	-0.6
4,930,306	+		Pf6N2E2_4238	0.47	-0.2
4,930,326	+		Pf6N2E2_4238	0.49	-0.4
4,930,326	+		Pf6N2E2_4238	0.49	-1.8
4,930,327	-		Pf6N2E2_4238	0.49	+0.5
4,930,327	-		Pf6N2E2_4238	0.49	-0.8
4,930,327	-		Pf6N2E2_4238	0.49	-0.4
4,930,400	-		Pf6N2E2_4238	0.54	+0.6
4,930,400	-		Pf6N2E2_4238	0.54	-0.0
4,930,400	-		Pf6N2E2_4238	0.54	+0.3
4,930,557	-		Pf6N2E2_4238	0.66	-0.5
4,930,629	-		Pf6N2E2_4238	0.71	+1.2
4,930,668	+		Pf6N2E2_4238	0.74	-0.4
4,930,669	-		Pf6N2E2_4238	0.74	-1.2
4,930,714	+		Pf6N2E2_4238	0.77	+0.3
4,930,714	+		Pf6N2E2_4238	0.77	-0.9
4,930,714	+		Pf6N2E2_4238	0.77	+0.3
4,930,714	+		Pf6N2E2_4238	0.77	+0.5
4,930,714	+		Pf6N2E2_4238	0.77	+0.6
4,930,714	+		Pf6N2E2_4238	0.77	-0.8
4,930,714	+		Pf6N2E2_4238	0.77	-0.7
4,930,715	-		Pf6N2E2_4238	0.77	+0.1
4,930,715	-		Pf6N2E2_4238	0.77	+0.7
4,930,873	+		Pf6N2E2_4238	0.89	+0.0
4,930,873	+		Pf6N2E2_4238	0.89	-0.0
4,930,944	+				-0.5
4,930,945	-				+0.6
4,930,995	+				+0.3
4,930,995	+				+0.4
4,930,995	+				-0.7
4,930,996	-				+0.3
4,930,996	-				+0.6
4,930,996	-				+1.1
4,930,996	-				+0.4
4,930,996	-				-0.7
4,930,996	-				+0.7
4,930,996	-				+0.5
4,930,999	+				+0.7
4,930,999	+				+1.0
4,930,999	+				+0.4
4,931,000	-				+0.2
4,931,000	-				+0.8
4,931,000	-				-0.4
4,931,000	-				-0.9
4,931,000	-				+0.4
4,931,131	+				-0.4
4,931,177	-		Pf6N2E2_4239	0.12	-0.6
4,931,223	+		Pf6N2E2_4239	0.16	-0.2
4,931,223	+		Pf6N2E2_4239	0.16	-0.5
4,931,223	+		Pf6N2E2_4239	0.16	-1.6
4,931,224	-		Pf6N2E2_4239	0.16	+1.0
4,931,224	-		Pf6N2E2_4239	0.16	+0.0
4,931,224	-		Pf6N2E2_4239	0.16	+0.9
4,931,328	+		Pf6N2E2_4239	0.24	+0.4
4,931,329	-		Pf6N2E2_4239	0.24	+0.1
4,931,329	-		Pf6N2E2_4239	0.24	+0.4
4,931,329	-		Pf6N2E2_4239	0.24	+0.4
4,931,329	-		Pf6N2E2_4239	0.24	+1.3
4,931,329	-		Pf6N2E2_4239	0.24	+1.4
4,931,357	+		Pf6N2E2_4239	0.26	+0.5
4,931,358	-		Pf6N2E2_4239	0.26	-0.1
4,931,474	+		Pf6N2E2_4239	0.36	-0.4
4,931,474	+		Pf6N2E2_4239	0.36	-0.4
4,931,475	-		Pf6N2E2_4239	0.36	-0.2
4,931,475	-		Pf6N2E2_4239	0.36	+0.9
4,931,475	-		Pf6N2E2_4239	0.36	+0.7
4,931,475	-		Pf6N2E2_4239	0.36	+0.1
4,931,475	-		Pf6N2E2_4239	0.36	+0.9
4,931,475	-		Pf6N2E2_4239	0.36	-1.0
4,931,475	-		Pf6N2E2_4239	0.36	-3.2
4,931,475	-		Pf6N2E2_4239	0.36	-0.0
4,931,475	-		Pf6N2E2_4239	0.36	+0.3
4,931,583	+		Pf6N2E2_4239	0.44	+0.3
4,931,583	+		Pf6N2E2_4239	0.44	+0.2
4,931,584	-		Pf6N2E2_4239	0.44	+1.2
4,931,584	-		Pf6N2E2_4239	0.44	+0.4
4,931,584	-		Pf6N2E2_4239	0.44	+0.1
4,931,584	-		Pf6N2E2_4239	0.44	+0.1
4,931,584	-		Pf6N2E2_4239	0.44	+0.4
4,931,584	-		Pf6N2E2_4239	0.44	+0.3
4,931,584	-		Pf6N2E2_4239	0.44	-0.1
4,931,584	-		Pf6N2E2_4239	0.44	+1.1
4,931,586	+		Pf6N2E2_4239	0.44	-0.4
4,931,586	+		Pf6N2E2_4239	0.44	-0.9
4,931,587	-		Pf6N2E2_4239	0.44	+0.1
4,931,754	+		Pf6N2E2_4239	0.58	+0.3
4,931,754	+		Pf6N2E2_4239	0.58	-1.5
4,931,754	+		Pf6N2E2_4239	0.58	+0.6
4,931,755	-		Pf6N2E2_4239	0.58	-1.2
4,931,853	+		Pf6N2E2_4239	0.65	+1.3
4,931,853	+		Pf6N2E2_4239	0.65	-0.0
4,931,854	-		Pf6N2E2_4239	0.66	-0.2
4,931,854	-		Pf6N2E2_4239	0.66	-0.2