Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3415

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
3,958,427	+		Pf6N2E2_3414	0.64	-0.2
3,958,429	+		Pf6N2E2_3414	0.64	-0.4
3,958,430	-		Pf6N2E2_3414	0.64	+1.3
3,958,490	+		Pf6N2E2_3414	0.66	+0.9
3,958,490	+		Pf6N2E2_3414	0.66	+0.5
3,958,490	+		Pf6N2E2_3414	0.66	+0.2
3,958,491	-		Pf6N2E2_3414	0.67	+0.8
3,958,491	-		Pf6N2E2_3414	0.67	-2.7
3,958,491	-		Pf6N2E2_3414	0.67	+2.3
3,958,491	-		Pf6N2E2_3414	0.67	-0.3
3,958,491	-		Pf6N2E2_3414	0.67	+0.5
3,958,491	-		Pf6N2E2_3414	0.67	+1.7
3,958,491	-		Pf6N2E2_3414	0.67	-0.8
3,958,501	+		Pf6N2E2_3414	0.67	-0.3
3,958,501	+		Pf6N2E2_3414	0.67	-0.2
3,958,563	+		Pf6N2E2_3414	0.70	+0.7
3,958,564	-		Pf6N2E2_3414	0.70	+0.4
3,958,564	-		Pf6N2E2_3414	0.70	+0.2
3,958,576	+		Pf6N2E2_3414	0.70	+0.1
3,958,577	-		Pf6N2E2_3414	0.70	+0.4
3,958,613	+		Pf6N2E2_3414	0.72	-0.8
3,958,613	+		Pf6N2E2_3414	0.72	-1.4
3,958,613	+		Pf6N2E2_3414	0.72	-0.2
3,958,613	+		Pf6N2E2_3414	0.72	-1.8
3,958,613	+		Pf6N2E2_3414	0.72	-0.7
3,958,613	+		Pf6N2E2_3414	0.72	+0.2
3,958,613	+		Pf6N2E2_3414	0.72	+0.3
3,958,614	-		Pf6N2E2_3414	0.72	+0.6
3,958,640	+		Pf6N2E2_3414	0.73	-2.1
3,958,640	+		Pf6N2E2_3414	0.73	+0.1
3,958,640	+		Pf6N2E2_3414	0.73	+0.8
3,958,640	+		Pf6N2E2_3414	0.73	+1.1
3,958,641	-		Pf6N2E2_3414	0.73	-1.5
3,958,641	-		Pf6N2E2_3414	0.73	+0.8
3,958,641	-		Pf6N2E2_3414	0.73	+0.6
3,958,641	-		Pf6N2E2_3414	0.73	+0.8
3,958,641	-		Pf6N2E2_3414	0.73	+0.3
3,958,683	+		Pf6N2E2_3414	0.75	-0.7
3,958,683	+		Pf6N2E2_3414	0.75	-0.1
3,958,684	-		Pf6N2E2_3414	0.75	+1.3
3,958,706	+		Pf6N2E2_3414	0.76	+0.3
3,958,706	+		Pf6N2E2_3414	0.76	-0.8
3,958,725	-		Pf6N2E2_3414	0.76	+0.0
3,958,725	-		Pf6N2E2_3414	0.76	-0.1
3,958,913	+		Pf6N2E2_3414	0.84	-1.1
3,958,913	+		Pf6N2E2_3414	0.84	+0.9
3,958,919	+		Pf6N2E2_3414	0.85	-0.6
3,958,919	+		Pf6N2E2_3414	0.85	+0.4
3,958,919	+		Pf6N2E2_3414	0.85	-0.6
3,958,919	+		Pf6N2E2_3414	0.85	+0.8
3,958,919	+		Pf6N2E2_3414	0.85	+0.2
3,958,920	-		Pf6N2E2_3414	0.85	+1.0
3,958,920	-		Pf6N2E2_3414	0.85	+0.1
3,958,952	+		Pf6N2E2_3414	0.86	-1.6
3,958,953	-		Pf6N2E2_3414	0.86	+0.5
3,958,953	-		Pf6N2E2_3414	0.86	+1.1
3,959,021	+		Pf6N2E2_3414	0.89	-0.3
3,959,021	+		Pf6N2E2_3414	0.89	-0.0
3,959,021	+		Pf6N2E2_3414	0.89	-0.2
3,959,021	+		Pf6N2E2_3414	0.89	+0.7
3,959,022	-		Pf6N2E2_3414	0.89	-0.1
3,959,022	-		Pf6N2E2_3414	0.89	+1.6
3,959,024	+		Pf6N2E2_3414	0.89	+0.4
3,959,024	+		Pf6N2E2_3414	0.89	-0.8
3,959,024	+		Pf6N2E2_3414	0.89	-0.9
3,959,024	+		Pf6N2E2_3414	0.89	+0.1
3,959,024	+		Pf6N2E2_3414	0.89	+0.3
3,959,024	+		Pf6N2E2_3414	0.89	-1.0
3,959,024	+		Pf6N2E2_3414	0.89	-0.4
3,959,025	-		Pf6N2E2_3414	0.89	+0.4
3,959,025	-		Pf6N2E2_3414	0.89	+0.6
3,959,025	-		Pf6N2E2_3414	0.89	+0.8
3,959,025	-		Pf6N2E2_3414	0.89	+0.8
3,959,025	-		Pf6N2E2_3414	0.89	-0.1
3,959,025	-		Pf6N2E2_3414	0.89	+1.3
3,959,069	+				+0.9
3,959,069	+				+0.5
3,959,082	-				-0.1
3,959,147	+				+0.6
3,959,147	+				+0.1
3,959,147	+				+0.4
3,959,147	+				+0.0
3,959,148	-				+0.1
3,959,148	-				+0.6
3,959,189	-				-0.4
3,959,189	-				-0.4
3,959,235	-				+0.4
3,959,235	-				-2.3
3,959,235	-				-0.4
3,959,235	-				-0.0
3,959,237	+				+0.5
3,959,237	+				+0.6
3,959,274	-				+0.8
3,959,274	-				+0.3
3,959,274	-				+0.7
3,959,282	+				-1.1
3,959,383	+				+0.4
3,959,383	+				+1.1
3,959,383	+				-1.3
3,959,383	+				+0.6
3,959,384	-				+0.5
3,959,384	-				-0.0
3,959,384	-				+0.0
3,959,442	+				+0.0
3,959,639	+		Pf6N2E2_3415	0.16	+0.3
3,959,639	+		Pf6N2E2_3415	0.16	+0.5
3,959,710	+		Pf6N2E2_3415	0.20	-0.4
3,959,711	-		Pf6N2E2_3415	0.21	+0.5
3,959,901	+		Pf6N2E2_3415	0.33	+0.0
3,959,901	+		Pf6N2E2_3415	0.33	-0.8
3,959,902	-		Pf6N2E2_3415	0.33	+0.9
3,959,902	-		Pf6N2E2_3415	0.33	+0.6
3,959,902	-		Pf6N2E2_3415	0.33	+0.0
3,959,902	-		Pf6N2E2_3415	0.33	-0.7
3,959,902	-		Pf6N2E2_3415	0.33	+0.9
3,959,902	-		Pf6N2E2_3415	0.33	+0.9
3,960,056	+		Pf6N2E2_3415	0.44	+0.2
3,960,056	+		Pf6N2E2_3415	0.44	-0.3
3,960,056	+		Pf6N2E2_3415	0.44	+1.3
3,960,057	-		Pf6N2E2_3415	0.44	+1.0
3,960,057	-		Pf6N2E2_3415	0.44	+1.5
3,960,057	-		Pf6N2E2_3415	0.44	-1.5
3,960,057	-		Pf6N2E2_3415	0.44	+0.7
3,960,125	+		Pf6N2E2_3415	0.48	+0.3
3,960,238	+		Pf6N2E2_3415	0.56	+0.4
3,960,238	+		Pf6N2E2_3415	0.56	+0.1
3,960,238	+		Pf6N2E2_3415	0.56	-0.3
3,960,238	+		Pf6N2E2_3415	0.56	+0.5
3,960,239	-		Pf6N2E2_3415	0.56	-0.3
3,960,239	-		Pf6N2E2_3415	0.56	+0.9
3,960,419	+		Pf6N2E2_3415	0.68	+1.7
3,960,419	+		Pf6N2E2_3415	0.68	+1.0
3,960,419	+		Pf6N2E2_3415	0.68	+0.1
3,960,427	+		Pf6N2E2_3415	0.69	+0.5
3,960,428	-		Pf6N2E2_3415	0.69	-0.1
3,960,460	+		Pf6N2E2_3415	0.71	+0.5
3,960,460	+		Pf6N2E2_3415	0.71	+0.6
3,960,461	-		Pf6N2E2_3415	0.71	+0.2
3,960,461	-		Pf6N2E2_3415	0.71	+1.2
3,960,461	-		Pf6N2E2_3415	0.71	+0.1
3,960,461	-		Pf6N2E2_3415	0.71	-0.2
3,960,538	+		Pf6N2E2_3415	0.76	-1.0
3,960,538	+		Pf6N2E2_3415	0.76	+0.3
3,960,538	+		Pf6N2E2_3415	0.76	+0.5
3,960,539	-		Pf6N2E2_3415	0.76	-0.0
3,960,539	-		Pf6N2E2_3415	0.76	+1.3
3,960,539	-		Pf6N2E2_3415	0.76	+0.2
3,960,539	-		Pf6N2E2_3415	0.76	+0.9
3,960,810	-				+0.4
3,960,958	+				+0.6
3,961,078	+				+0.8
3,961,078	+				-0.8
3,961,079	-				+0.9
3,961,079	-				+1.0
3,961,088	-				-0.8
3,961,178	+				+0.4
3,961,207	+				+0.9
3,961,207	+				+0.4
3,961,215	+				-0.8
3,961,216	-				+0.9
3,961,242	-				+0.3
3,961,269	+				-0.6
3,961,270	-				+0.8
3,961,290	+				-0.4
3,961,290	+				-0.0
3,961,290	+				+0.4
3,961,290	+				+0.3
3,961,290	+				-0.2
3,961,290	+				-1.2
3,961,290	+				+0.9
3,961,291	-				+1.0
3,961,291	-				+1.1
3,961,291	-				-0.4
3,961,291	-				+0.9
3,961,291	-				+0.5
3,961,291	-				+0.3
3,961,291	-				+0.3
3,961,291	-				+0.5
3,961,291	-				-0.0
3,961,291	-				-0.1
3,961,292	+				-0.3
3,961,293	-				+0.0
3,961,293	-				-0.1
3,961,308	+				-1.2
3,961,452	+				-0.3
3,961,452	+				+0.3
3,961,565	+				-1.0
3,961,565	+				+0.1
3,961,565	+				-0.2
3,961,565	+				+0.6
3,961,566	-				-0.0
3,961,566	-				-0.8
3,961,566	-				-0.5
3,961,566	-				+0.1
3,961,596	+				+1.2
3,961,597	-				+0.2
3,961,617	+				-0.3
3,961,617	+				-0.2
3,961,618	-				+0.8
3,961,618	-				+0.1
3,961,618	-				+1.0
3,961,630	-				+0.7
3,961,630	-				-0.5
3,961,634	+				-1.3
3,961,634	+				+1.1
3,961,634	+				+0.3
3,961,634	+				+0.7
3,961,634	+				+1.0
3,961,634	+				+0.1
3,961,634	+				+0.3
3,961,634	+				-0.8
3,961,635	-				+1.8
3,961,635	-				+0.2
3,961,635	-				+0.6
3,961,635	-				+0.3
3,961,657	+				+0.3
3,961,657	+				+0.8
3,961,657	+				+0.4
3,961,657	+				+0.2
3,961,657	+				-1.0
3,961,657	+				-0.3
3,961,657	+				+0.4
3,961,657	+				+0.0
3,961,657	+				+0.3
3,961,657	+				+0.7
3,961,658	-				+0.2
3,961,658	-				-0.5
3,961,658	-				-1.2
3,961,670	+				+0.6
3,961,670	+				-0.7
3,961,671	-				-1.3
3,961,671	-				-0.3
3,961,671	-				+0.2
3,961,711	+				+0.8
3,961,711	+				+1.1
3,961,712	-				-1.4
3,961,712	-				+0.5
3,961,712	-				+1.9
3,961,712	-				-0.1
3,961,712	-				+0.4
3,961,810	-				-1.8
3,961,810	-				-1.4
3,961,810	-				+0.2