Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS21750

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
5,346,251	+		CA265_RS21740	0.71	-3.0
5,346,252	-		CA265_RS21740	0.71	+0.0
5,346,252	-		CA265_RS21740	0.71	-0.1
5,346,252	-		CA265_RS21740	0.71	-0.9
5,346,255	+		CA265_RS21740	0.72	-3.2
5,346,283	+		CA265_RS21740	0.77	-3.9
5,346,320	-		CA265_RS21740	0.84	+1.5
5,346,320	-		CA265_RS21740	0.84	-0.5
5,346,330	+		CA265_RS21740	0.86	-3.5
5,346,331	-		CA265_RS21740	0.86	-0.3
5,346,400	+				-1.6
5,346,401	-				-0.2
5,346,404	+				-0.8
5,346,482	+				-2.2
5,346,506	-		CA265_RS21745	0.16	-2.6
5,346,506	-		CA265_RS21745	0.16	+0.2
5,346,509	+		CA265_RS21745	0.17	-1.6
5,346,509	+		CA265_RS21745	0.17	-1.1
5,346,560	+		CA265_RS21745	0.33	-1.2
5,346,601	+		CA265_RS21745	0.46	-3.4
5,346,602	-		CA265_RS21745	0.46	-1.1
5,346,602	-		CA265_RS21745	0.46	-2.3
5,346,893	-				+1.3
5,346,893	-				+0.5
5,347,009	+				-0.6
5,347,009	+				-1.2
5,347,010	-				-0.1
5,347,010	-				+0.5
5,347,010	-				+1.8
5,347,013	+				-1.1
5,347,019	-				+0.7
5,347,155	-				+0.5
5,347,208	-				-1.0
5,347,268	+		CA265_RS21750	0.14	+0.2
5,347,311	+		CA265_RS21750	0.30	-0.1
5,347,372	+		CA265_RS21750	0.53	-1.4
5,347,409	-		CA265_RS21750	0.67	+0.4
5,347,410	+		CA265_RS21750	0.67	+0.2
5,347,479	+				-3.3
5,347,482	+				+0.7
5,347,482	+				-0.8
5,347,487	+				-0.7
5,347,487	+				+0.2
5,347,519	+				+0.5
5,347,520	-				+0.4
5,347,562	-		CA265_RS21755	0.25	+0.8
5,347,601	-		CA265_RS21755	0.42	+0.3
5,347,620	+		CA265_RS21755	0.50	-0.4
5,347,650	-		CA265_RS21755	0.63	-0.9
5,347,663	-		CA265_RS21755	0.68	-2.2
5,347,701	-		CA265_RS21755	0.85	+0.5
5,347,718	-				+0.2
5,347,741	-				+0.5
5,347,741	-				+0.2
5,347,741	-				+0.5
5,347,741	-				+0.5
5,347,761	-				-0.1
5,347,861	-		CA265_RS21760	0.31	+1.0
5,347,901	-		CA265_RS21760	0.41	+0.5
5,347,901	-		CA265_RS21760	0.41	-1.4
5,347,939	-		CA265_RS21760	0.50	-0.3
5,348,011	-		CA265_RS21760	0.69	+1.0
5,348,011	-		CA265_RS21760	0.69	-0.9
5,348,044	+		CA265_RS21760	0.77	-1.7
5,348,066	-		CA265_RS21760	0.83	+0.2
5,348,132	-				+0.2
5,348,132	-				-0.8
5,348,132	-				+0.0
5,348,132	-				-0.0
5,348,132	-				+0.5
5,348,164	-				+0.1
5,348,203	+				+0.4
5,348,290	+		CA265_RS21765	0.22	+2.7
5,348,291	-		CA265_RS21765	0.23	+0.3
5,348,299	+		CA265_RS21765	0.24	+0.4
5,348,337	+		CA265_RS21765	0.33	+1.0
5,348,337	+		CA265_RS21765	0.33	+0.7
5,348,338	-		CA265_RS21765	0.33	+0.8
5,348,410	+		CA265_RS21765	0.49	+0.5
5,348,424	+		CA265_RS21765	0.52	+0.6
5,348,424	+		CA265_RS21765	0.52	+1.7
5,348,425	-		CA265_RS21765	0.52	-0.0
5,348,425	-		CA265_RS21765	0.52	-0.5
5,348,425	-		CA265_RS21765	0.52	-0.8
5,348,490	-		CA265_RS21765	0.66	+0.4
5,348,491	+		CA265_RS21765	0.67	+0.9
5,348,492	-		CA265_RS21765	0.67	-1.3