Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS21675

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
5,331,234	-		CA265_RS21665	0.80	-0.8
5,331,257	+		CA265_RS21665	0.81	+0.9
5,331,261	-		CA265_RS21665	0.81	-0.2
5,331,274	+		CA265_RS21665	0.82	+2.3
5,331,296	-		CA265_RS21665	0.83	-1.2
5,331,402	-		CA265_RS21665	0.89	-0.9
5,331,454	+				+0.8
5,331,455	-				-1.6
5,331,455	-				-1.0
5,331,455	-				-0.6
5,331,456	+				+0.9
5,331,456	+				+1.5
5,331,457	-				-1.4
5,331,457	-				-0.4
5,331,488	-				-1.1
5,331,542	+				+1.6
5,331,542	+				+2.1
5,331,543	-				-0.1
5,331,551	+				+2.8
5,331,552	-				+0.2
5,331,552	-				+0.1
5,331,583	+				+1.9
5,331,583	+				+2.5
5,331,600	+				+1.2
5,331,601	-				+0.3
5,331,620	+				+0.5
5,331,621	-				-0.8
5,331,621	-				-0.1
5,331,627	+				+2.2
5,331,628	-				-1.0
5,331,771	+		CA265_RS21670	0.45	+2.5
5,331,812	-		CA265_RS21670	0.56	-1.8
5,331,818	-				-1.1
5,331,819	+		CA265_RS21670	0.58	+1.2
5,331,874	+		CA265_RS21670	0.73	+1.5
5,331,875	-		CA265_RS21670	0.73	-0.9
5,331,910	-		CA265_RS21670	0.83	+0.1
5,331,962	-				-1.3
5,331,997	-				-1.5
5,331,997	-				-0.6
5,332,052	-				-0.3
5,332,085	+				+2.0
5,332,086	-				-1.4
5,332,117	+				+2.1
5,332,204	+				+0.9
5,332,226	+				-0.4
5,332,309	+				+0.4
5,332,467	+		CA265_RS21675	0.18	-1.1
5,332,517	+		CA265_RS21675	0.22	+1.8
5,332,583	+		CA265_RS21675	0.26	+1.2
5,332,592	+		CA265_RS21675	0.27	+0.5
5,332,592	+		CA265_RS21675	0.27	-0.1
5,332,670	+		CA265_RS21675	0.32	+0.6
5,332,676	+		CA265_RS21675	0.33	+0.5
5,332,676	+		CA265_RS21675	0.33	+0.3
5,332,701	+		CA265_RS21675	0.35	-1.7
5,332,764	+		CA265_RS21675	0.39	-0.4
5,332,764	+		CA265_RS21675	0.39	+1.2
5,332,881	+		CA265_RS21675	0.47	-0.2
5,332,980	+		CA265_RS21675	0.54	+1.3
5,333,049	+		CA265_RS21675	0.59	+1.6
5,333,049	+		CA265_RS21675	0.59	+1.1
5,333,049	+		CA265_RS21675	0.59	+1.0
5,333,049	+		CA265_RS21675	0.59	+1.1
5,333,073	+		CA265_RS21675	0.61	+0.6
5,333,073	+		CA265_RS21675	0.61	+1.4
5,333,114	+		CA265_RS21675	0.64	+0.2
5,333,154	+		CA265_RS21675	0.67	+1.3
5,333,275	+		CA265_RS21675	0.75	+0.1
5,333,296	+		CA265_RS21675	0.77	+0.5
5,333,298	+		CA265_RS21675	0.77	+1.0
5,333,472	+		CA265_RS21675	0.89	+1.1
5,333,514	+				+1.3
5,333,641	+				+1.4
5,333,655	+				+1.4