Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS17655

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
4,404,035	-		CA265_RS17650	0.68	-0.4
4,404,054	+		CA265_RS17650	0.68	+0.6
4,404,097	-		CA265_RS17650	0.70	-0.2
4,404,097	-		CA265_RS17650	0.70	-0.1
4,404,149	+		CA265_RS17650	0.72	+0.4
4,404,279	+		CA265_RS17650	0.76	+0.7
4,404,279	+		CA265_RS17650	0.76	+0.4
4,404,279	+		CA265_RS17650	0.76	+0.0
4,404,283	+		CA265_RS17650	0.76	-1.3
4,404,318	-		CA265_RS17650	0.77	-0.5
4,404,390	+		CA265_RS17650	0.79	+0.4
4,404,391	-		CA265_RS17650	0.79	-0.5
4,404,448	-		CA265_RS17650	0.81	-0.2
4,404,448	-		CA265_RS17650	0.81	-0.4
4,404,448	-		CA265_RS17650	0.81	-1.4
4,404,524	+		CA265_RS17650	0.84	+0.8
4,404,525	-		CA265_RS17650	0.84	-1.0
4,404,556	+		CA265_RS17650	0.85	+0.4
4,404,579	+		CA265_RS17650	0.85	+0.1
4,404,644	-		CA265_RS17650	0.87	-0.6
4,404,688	+		CA265_RS17650	0.89	-0.7
4,404,703	-		CA265_RS17650	0.89	-2.4
4,404,760	-				-0.5
4,404,795	+				-0.6
4,404,828	+				+0.5
4,404,829	-				+1.3
4,404,874	+				-0.5
4,404,886	-				-0.2
4,404,898	+				+0.1
4,404,898	+				+0.7
4,404,898	+				+0.3
4,404,904	-				+0.1
4,404,918	+				-0.1
4,404,930	+				+0.4
4,404,934	-				-1.5
4,404,944	+				+1.1
4,404,945	-				+0.1
4,405,018	-				+0.3
4,405,021	+				-0.4
4,405,021	+				+0.7
4,405,022	-				-0.7
4,405,075	+				+0.6
4,405,125	-				-0.0
4,405,180	+		CA265_RS17655	0.11	+0.8
4,405,214	+				+1.4
4,405,228	+		CA265_RS17655	0.15	+1.0
4,405,241	+		CA265_RS17655	0.16	+0.5
4,405,242	-		CA265_RS17655	0.16	-0.0
4,405,325	+		CA265_RS17655	0.22	+0.6
4,405,332	+		CA265_RS17655	0.23	+1.1
4,405,332	+		CA265_RS17655	0.23	+0.7
4,405,463	-		CA265_RS17655	0.33	-0.6
4,405,467	-		CA265_RS17655	0.33	-0.0
4,405,467	-		CA265_RS17655	0.33	+0.8
4,405,487	-		CA265_RS17655	0.34	+0.2
4,405,508	-		CA265_RS17655	0.36	+0.3
4,405,540	+		CA265_RS17655	0.39	-0.7
4,405,597	+		CA265_RS17655	0.43	+0.3
4,405,598	-		CA265_RS17655	0.43	+0.3
4,405,598	-		CA265_RS17655	0.43	-0.2
4,405,619	+		CA265_RS17655	0.45	+0.0
4,405,620	-		CA265_RS17655	0.45	+0.1
4,405,667	-		CA265_RS17655	0.48	-0.7
4,405,670	+		CA265_RS17655	0.48	-0.9
4,405,671	-		CA265_RS17655	0.49	-0.0
4,405,671	-		CA265_RS17655	0.49	-2.2
4,405,690	+		CA265_RS17655	0.50	+0.0
4,405,704	-		CA265_RS17655	0.51	-0.0
4,405,730	+		CA265_RS17655	0.53	+1.4
4,405,731	-		CA265_RS17655	0.53	-0.4
4,405,733	+		CA265_RS17655	0.53	+0.3
4,405,733	+		CA265_RS17655	0.53	+1.3
4,405,733	+		CA265_RS17655	0.53	+0.9
4,405,746	-		CA265_RS17655	0.54	-1.3
4,405,761	-		CA265_RS17655	0.55	+1.0
4,405,817	+		CA265_RS17655	0.60	+0.6
4,405,826	+		CA265_RS17655	0.60	+1.4
4,405,843	+		CA265_RS17655	0.62	+0.3
4,405,867	-		CA265_RS17655	0.63	-0.5
4,405,895	+		CA265_RS17655	0.66	-0.9
4,405,979	-		CA265_RS17655	0.72	+0.3
4,406,094	-		CA265_RS17655	0.81	-0.9
4,406,138	-		CA265_RS17655	0.84	+1.8
4,406,177	+		CA265_RS17655	0.87	+0.0
4,406,178	-		CA265_RS17655	0.87	-0.6
4,406,178	-		CA265_RS17655	0.87	-0.3
4,406,200	+		CA265_RS17655	0.89	+1.5
4,406,224	+				-0.1
4,406,241	-				-0.5
4,406,246	+				+0.4
4,406,280	+				-0.8
4,406,280	+				+0.6
4,406,281	-				-0.3
4,406,304	-				-0.2
4,406,340	-				-0.0
4,406,367	+				-0.7
4,406,389	+				-0.8
4,406,454	-				-0.8
4,406,459	+				-0.7
4,406,536	+		CA265_RS17660	0.13	+0.6
4,406,537	-		CA265_RS17660	0.13	-0.9
4,406,542	-		CA265_RS17660	0.14	-1.6
4,406,648	+		CA265_RS17660	0.27	-0.3
4,406,710	+		CA265_RS17660	0.34	+0.9
4,406,722	+		CA265_RS17660	0.36	-1.9
4,406,726	+		CA265_RS17660	0.36	+0.2
4,406,745	+		CA265_RS17660	0.39	-0.5
4,406,842	+		CA265_RS17660	0.50	-0.2
4,406,851	+		CA265_RS17660	0.52	-0.1
4,406,851	+		CA265_RS17660	0.52	-0.8
4,406,851	+		CA265_RS17660	0.52	-0.9
4,406,852	-		CA265_RS17660	0.52	-2.6
4,406,852	-		CA265_RS17660	0.52	-1.0
4,406,858	+		CA265_RS17660	0.52	-1.1
4,406,932	+		CA265_RS17660	0.61	+0.1
4,406,963	-		CA265_RS17660	0.65	+1.6
4,406,963	-		CA265_RS17660	0.65	-0.2
4,406,993	+		CA265_RS17660	0.69	+0.5
4,407,046	+		CA265_RS17660	0.75	-0.0
4,407,071	+		CA265_RS17660	0.78	-0.2
4,407,118	-		CA265_RS17660	0.84	-0.3
4,407,219	-				-0.3
4,407,273	+				+0.2
4,407,281	+				+0.1