Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS16185

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
4,063,268	+		CA265_RS16175	0.66	-0.2
4,063,268	+		CA265_RS16175	0.66	+0.1
4,063,272	+		CA265_RS16175	0.66	-0.3
4,063,273	-		CA265_RS16175	0.66	-0.2
4,063,290	+		CA265_RS16175	0.68	-0.1
4,063,291	-		CA265_RS16175	0.68	-0.3
4,063,316	-		CA265_RS16175	0.71	-0.2
4,063,370	-		CA265_RS16175	0.76	+1.0
4,063,380	+		CA265_RS16175	0.77	+0.4
4,063,482	-		CA265_RS16175	0.87	-1.0
4,063,491	+		CA265_RS16175	0.88	-0.5
4,063,491	+		CA265_RS16175	0.88	+0.2
4,063,494	-		CA265_RS16175	0.88	+0.7
4,063,617	+				+0.1
4,063,632	-				-0.3
4,063,646	-				-1.3
4,063,677	-				-0.5
4,063,679	-				+0.1
4,063,686	-				-0.5
4,063,704	-				+0.0
4,063,844	+		CA265_RS16180	0.22	-0.3
4,063,855	-		CA265_RS16180	0.24	-0.4
4,063,887	+		CA265_RS16180	0.32	+0.1
4,063,888	-		CA265_RS16180	0.32	-0.5
4,063,888	-		CA265_RS16180	0.32	-0.7
4,063,927	-		CA265_RS16180	0.41	+0.4
4,063,931	+		CA265_RS16180	0.42	+0.1
4,063,999	+		CA265_RS16180	0.58	-0.6
4,063,999	+		CA265_RS16180	0.58	+0.3
4,064,000	-		CA265_RS16180	0.58	+0.1
4,064,057	+		CA265_RS16180	0.72	+0.3
4,064,061	+		CA265_RS16180	0.73	-0.2
4,064,110	+		CA265_RS16180	0.84	+0.4
4,064,155	-				-0.6
4,064,157	+				-0.3
4,064,178	-				-0.0
4,064,242	+				+1.3
4,064,243	-				+0.2
4,064,339	-		CA265_RS16185	0.17	-0.0
4,064,346	+		CA265_RS16185	0.18	-0.1
4,064,347	-		CA265_RS16185	0.18	-0.8
4,064,381	-		CA265_RS16185	0.21	-0.1
4,064,400	-		CA265_RS16185	0.23	-0.2
4,064,400	-		CA265_RS16185	0.23	+0.3
4,064,458	-		CA265_RS16185	0.29	+0.6
4,064,458	-		CA265_RS16185	0.29	+0.5
4,064,472	+		CA265_RS16185	0.31	-0.3
4,064,522	-		CA265_RS16185	0.36	+1.3
4,064,545	+		CA265_RS16185	0.38	+0.1
4,064,549	-		CA265_RS16185	0.38	-0.2
4,064,569	+		CA265_RS16185	0.41	-0.4
4,064,606	-		CA265_RS16185	0.44	+0.4
4,064,650	+		CA265_RS16185	0.49	+1.0
4,064,681	-		CA265_RS16185	0.52	+0.4
4,064,689	+		CA265_RS16185	0.53	+0.3
4,064,778	+		CA265_RS16185	0.62	+0.3
4,064,784	+		CA265_RS16185	0.63	-0.5
4,064,784	+		CA265_RS16185	0.63	+0.6
4,064,784	+		CA265_RS16185	0.63	+0.5
4,064,814	+		CA265_RS16185	0.66	-0.7
4,064,815	-		CA265_RS16185	0.66	+1.4
4,064,833	+		CA265_RS16185	0.68	+0.9
4,064,855	-		CA265_RS16185	0.70	-1.2
4,064,859	+		CA265_RS16185	0.70	+0.2
4,064,946	-		CA265_RS16185	0.79	+0.6
4,064,980	+		CA265_RS16185	0.83	-0.2
4,065,033	+		CA265_RS16185	0.88	+0.5
4,065,034	-		CA265_RS16185	0.89	+0.5
4,065,036	-		CA265_RS16185	0.89	+1.1
4,065,036	-		CA265_RS16185	0.89	+0.7
4,065,036	-		CA265_RS16185	0.89	-0.2
4,065,069	+				-0.3
4,065,078	+				+1.0
4,065,149	-				+0.6
4,065,210	+				+0.6
4,065,210	+				-0.7
4,065,210	+				+0.3
4,065,286	+				-2.7
4,065,307	-				+0.4
4,065,525	-		CA265_RS16190	0.17	-0.2
4,065,530	+		CA265_RS16190	0.17	+0.6
4,065,531	-		CA265_RS16190	0.17	+0.3
4,065,574	-		CA265_RS16190	0.20	-0.4
4,065,574	-		CA265_RS16190	0.20	+0.8
4,065,574	-		CA265_RS16190	0.20	-0.7
4,065,582	-		CA265_RS16190	0.21	+0.4
4,065,611	+		CA265_RS16190	0.23	+1.9
4,065,633	-		CA265_RS16190	0.25	+0.3
4,065,674	+		CA265_RS16190	0.28	-0.3
4,065,678	+		CA265_RS16190	0.28	-0.2
4,065,679	-		CA265_RS16190	0.28	+0.6
4,065,716	-		CA265_RS16190	0.31	+0.0
4,065,736	+		CA265_RS16190	0.33	-0.8
4,065,737	-		CA265_RS16190	0.33	+0.9
4,065,739	-		CA265_RS16190	0.33	+0.9
4,065,739	-		CA265_RS16190	0.33	+0.9
4,065,742	+		CA265_RS16190	0.33	-0.8
4,065,870	+		CA265_RS16190	0.43	+0.9
4,065,916	+		CA265_RS16190	0.46	+2.4
4,065,939	-		CA265_RS16190	0.48	+0.2
4,065,967	+		CA265_RS16190	0.50	+1.2
4,066,010	-		CA265_RS16190	0.53	+1.5
4,066,024	+		CA265_RS16190	0.54	-0.5
4,066,070	-		CA265_RS16190	0.58	+0.8