Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15580

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
3,918,267	-		CA265_RS15575	0.73	-0.6
3,918,282	-		CA265_RS15575	0.74	-0.2
3,918,282	-		CA265_RS15575	0.74	-0.2
3,918,296	-		CA265_RS15575	0.75	-0.4
3,918,369	-		CA265_RS15575	0.79	-0.9
3,918,372	-		CA265_RS15575	0.79	+0.5
3,918,487	+		CA265_RS15575	0.86	+0.1
3,918,488	-		CA265_RS15575	0.86	+0.7
3,918,523	+		CA265_RS15575	0.88	-0.1
3,918,524	-		CA265_RS15575	0.88	+0.7
3,918,524	-		CA265_RS15575	0.88	-0.6
3,918,524	-		CA265_RS15575	0.88	+1.3
3,918,592	+				+0.1
3,918,594	+				-0.4
3,918,594	+				+1.3
3,918,595	-				-0.1
3,918,595	-				+0.5
3,918,598	+				-0.2
3,918,683	+				-0.1
3,918,683	+				+1.3
3,918,683	+				+0.4
3,918,720	+				+0.9
3,918,722	+				-1.1
3,918,772	+				+0.4
3,918,805	-				-1.6
3,919,146	+				+0.5
3,919,172	+				+0.1
3,919,205	-				-1.4
3,919,245	+				+0.2
3,919,254	-				-1.0
3,919,258	+				+1.2
3,919,258	+				+0.7
3,919,258	+				+0.6
3,919,260	+				+0.7
3,919,260	+				+1.1
3,919,260	+				+2.0
3,919,274	-				-0.6
3,919,282	+				+0.2
3,919,320	+				+0.6
3,919,339	+		CA265_RS15580	0.12	+0.1
3,919,340	-		CA265_RS15580	0.12	+1.4
3,919,401	+		CA265_RS15580	0.20	+0.0
3,919,527	+		CA265_RS15580	0.37	+1.2
3,919,550	+		CA265_RS15580	0.40	+1.0
3,919,550	+		CA265_RS15580	0.40	+0.0
3,919,575	+		CA265_RS15580	0.43	-0.4
3,919,606	-		CA265_RS15580	0.47	+0.2
3,919,658	+		CA265_RS15580	0.54	-0.3
3,919,662	+		CA265_RS15580	0.54	-0.2
3,919,665	-		CA265_RS15580	0.55	+1.1
3,919,896	+		CA265_RS15580	0.86	+0.7
3,919,897	-		CA265_RS15580	0.86	+0.4
3,919,897	-		CA265_RS15580	0.86	+2.0
3,919,902	+		CA265_RS15580	0.86	+0.3
3,919,903	-		CA265_RS15580	0.86	+0.2
3,919,923	+		CA265_RS15580	0.89	+0.0
3,919,933	-				-0.0
3,919,957	+				+2.0
3,920,036	+				-1.0
3,920,067	+				-1.3
3,920,078	-				-0.2
3,920,114	+				-1.1
3,920,115	-				+0.8
3,920,147	+				+1.2
3,920,148	-				-1.2
3,920,163	+				+0.0
3,920,163	+				+0.3
3,920,216	-				-0.2
3,920,216	-				-0.2
3,920,227	+				+0.4
3,920,278	-				+0.2
3,920,286	-				+0.7
3,920,353	-		CA265_RS15585	0.11	+0.6
3,920,392	-		CA265_RS15585	0.13	-0.4
3,920,411	+		CA265_RS15585	0.13	+0.0
3,920,412	-		CA265_RS15585	0.13	+0.4
3,920,436	-		CA265_RS15585	0.14	-0.4
3,920,441	+		CA265_RS15585	0.15	-1.0
3,920,442	-		CA265_RS15585	0.15	+1.0
3,920,509	+		CA265_RS15585	0.17	+2.1
3,920,530	+		CA265_RS15585	0.18	-0.3
3,920,654	+		CA265_RS15585	0.23	+0.1
3,920,655	-		CA265_RS15585	0.23	+0.2
3,920,667	-		CA265_RS15585	0.24	+0.2
3,920,670	-		CA265_RS15585	0.24	+0.8
3,920,732	-		CA265_RS15585	0.26	-0.1
3,920,732	-		CA265_RS15585	0.26	-0.4
3,920,736	-		CA265_RS15585	0.27	+0.2
3,920,736	-		CA265_RS15585	0.27	+1.5
3,920,739	+		CA265_RS15585	0.27	+0.1
3,920,740	-		CA265_RS15585	0.27	-0.9
3,920,754	+		CA265_RS15585	0.27	-0.1
3,920,754	+		CA265_RS15585	0.27	-0.2
3,920,828	+		CA265_RS15585	0.30	-0.8
3,920,884	-		CA265_RS15585	0.32	+1.8
3,920,906	+		CA265_RS15585	0.33	-1.2
3,920,987	+		CA265_RS15585	0.37	-0.2
3,920,988	-		CA265_RS15585	0.37	-1.7