Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS14485

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
3,650,754	+		CA265_RS14475	0.52	+1.4
3,650,830	-		CA265_RS14475	0.67	-1.1
3,650,872	-		CA265_RS14475	0.75	+0.5
3,650,897	-		CA265_RS14475	0.80	+1.0
3,650,897	-		CA265_RS14475	0.80	-0.3
3,650,903	-		CA265_RS14475	0.81	+0.3
3,650,949	+				+0.9
3,650,972	+				+1.8
3,650,998	+				-0.0
3,651,000	+				+0.9
3,651,001	-				+0.1
3,651,001	-				-1.0
3,651,001	-				-1.0
3,651,005	+				+0.7
3,651,005	+				+2.9
3,651,006	-				-0.4
3,651,006	-				-0.6
3,651,049	-				-0.7
3,651,081	+		CA265_RS14480	0.13	+0.5
3,651,088	+		CA265_RS14480	0.14	+1.3
3,651,111	-		CA265_RS14480	0.17	+1.4
3,651,211	-		CA265_RS14480	0.34	-1.2
3,651,218	-		CA265_RS14480	0.35	+0.3
3,651,373	+		CA265_RS14480	0.60	+0.7
3,651,379	-		CA265_RS14480	0.61	-0.6
3,651,380	+		CA265_RS14480	0.61	+2.3
3,651,396	-		CA265_RS14480	0.64	-0.7
3,651,396	-		CA265_RS14480	0.64	+0.4
3,651,441	+		CA265_RS14480	0.71	+2.0
3,651,441	+		CA265_RS14480	0.71	+1.1
3,651,442	-		CA265_RS14480	0.71	+1.1
3,651,589	-				+0.8
3,651,654	+				+1.4
3,651,655	-				-1.6
3,651,677	-				-2.1
3,651,682	-				-1.1
3,651,695	-				-1.1
3,651,698	+				+1.8
3,651,699	-				-2.6
3,651,787	+				-1.8
3,651,814	+				-1.4
3,651,818	+				-1.9
3,651,883	+				+0.1
3,651,884	-				+1.9
3,651,908	+				+0.4
3,651,911	-				+2.2
3,651,922	+				+0.9
3,651,973	+		CA265_RS14485	0.11	-0.1
3,651,974	-		CA265_RS14485	0.11	+2.2
3,651,978	+		CA265_RS14485	0.11	-0.5
3,652,031	-		CA265_RS14485	0.14	+2.1
3,652,109	-		CA265_RS14485	0.17	+1.9
3,652,109	-		CA265_RS14485	0.17	+2.0
3,652,164	+		CA265_RS14485	0.20	-2.8
3,652,204	+		CA265_RS14485	0.22	+1.5
3,652,204	+		CA265_RS14485	0.22	+1.8
3,652,244	-		CA265_RS14485	0.23	+2.9
3,652,299	+		CA265_RS14485	0.26	+2.1
3,652,299	+		CA265_RS14485	0.26	+1.5
3,652,300	-		CA265_RS14485	0.26	+2.3
3,652,300	-		CA265_RS14485	0.26	+2.1
3,652,300	-		CA265_RS14485	0.26	+2.1
3,652,300	-		CA265_RS14485	0.26	+2.5
3,652,340	+		CA265_RS14485	0.28	+2.6
3,652,359	-		CA265_RS14485	0.29	+2.9
3,652,620	-		CA265_RS14485	0.40	+2.2
3,652,630	-		CA265_RS14485	0.41	+2.4
3,652,639	-		CA265_RS14485	0.41	+2.3
3,652,749	+		CA265_RS14485	0.46	+1.8
3,652,760	-		CA265_RS14485	0.47	+2.4
3,653,075	-		CA265_RS14485	0.61	-1.0
3,653,075	-		CA265_RS14485	0.61	-2.4
3,653,934	-				-0.9
3,653,937	+				-0.4
3,653,972	-				-1.0
3,654,035	+				+0.4
3,654,035	+				+1.1
3,654,080	+				-0.0
3,654,084	+				-1.6
3,654,614	+				+0.0
3,654,614	+				+0.4