Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13615

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
3,401,722	+				-0.6
3,401,722	+				-0.5
3,401,724	+				-0.8
3,401,725	-				+0.1
3,401,727	-				-0.9
3,401,756	+				-1.5
3,401,756	+				+0.3
3,401,758	+				-0.2
3,401,759	-				-1.6
3,401,768	+				-0.6
3,401,813	+				+0.3
3,401,831	+				+0.0
3,401,831	+				-0.5
3,401,834	-				+0.0
3,401,852	-				+0.2
3,401,953	+				+0.5
3,401,953	+				+0.3
3,401,954	-				-1.1
3,401,986	+		CA265_RS13610	0.14	-0.5
3,401,986	+		CA265_RS13610	0.14	-0.8
3,401,986	+		CA265_RS13610	0.14	+0.3
3,401,987	-		CA265_RS13610	0.14	-0.4
3,401,987	-		CA265_RS13610	0.14	-0.8
3,401,987	-		CA265_RS13610	0.14	-0.1
3,401,987	-		CA265_RS13610	0.14	-0.8
3,402,030	+		CA265_RS13610	0.22	-0.0
3,402,031	-		CA265_RS13610	0.22	-0.6
3,402,229	+		CA265_RS13610	0.58	-0.1
3,402,252	+		CA265_RS13610	0.62	-1.3
3,402,253	-		CA265_RS13610	0.62	-1.0
3,402,253	-		CA265_RS13610	0.62	-0.3
3,402,258	+		CA265_RS13610	0.63	-0.5
3,402,258	+		CA265_RS13610	0.63	-0.3
3,402,280	-		CA265_RS13610	0.67	+0.3
3,402,343	-		CA265_RS13610	0.79	+0.7
3,402,436	+				+0.2
3,402,438	+				+0.2
3,402,438	+				+0.9
3,402,439	-				-0.6
3,402,440	+				-0.3
3,402,440	+				+0.2
3,402,454	+				-0.2
3,402,468	-				-0.6
3,402,468	-				-0.1
3,402,479	-				-0.7
3,402,504	+				+0.3
3,402,518	-				+1.3
3,402,518	-				-2.5
3,402,589	+				+0.4
3,402,590	-				-0.3
3,402,590	-				-0.6
3,402,649	-				-0.2
3,402,748	+				+0.7
3,402,749	-				-0.1
3,402,751	+				-0.2
3,402,783	-		CA265_RS13615	0.12	-1.0
3,402,805	-		CA265_RS13615	0.14	-1.3
3,402,879	-		CA265_RS13615	0.20	-0.7
3,402,879	-		CA265_RS13615	0.20	+0.3
3,402,949	+		CA265_RS13615	0.26	+1.9
3,402,950	-		CA265_RS13615	0.26	+1.1
3,403,048	-		CA265_RS13615	0.35	-0.7
3,403,048	-		CA265_RS13615	0.35	+0.2
3,403,143	-		CA265_RS13615	0.43	+0.7
3,403,143	-		CA265_RS13615	0.43	-0.4
3,403,143	-		CA265_RS13615	0.43	+1.2
3,403,188	+		CA265_RS13615	0.46	+0.3
3,403,218	+		CA265_RS13615	0.49	+0.1
3,403,287	-		CA265_RS13615	0.55	+0.1
3,403,292	+		CA265_RS13615	0.55	+0.0
3,403,361	+		CA265_RS13615	0.61	+0.7
3,403,367	+		CA265_RS13615	0.62	-0.6
3,403,438	+		CA265_RS13615	0.68	+0.0
3,403,441	+		CA265_RS13615	0.68	-0.2
3,403,455	+		CA265_RS13615	0.69	+0.3
3,403,456	-		CA265_RS13615	0.69	+0.4
3,403,470	+		CA265_RS13615	0.70	+1.0
3,403,549	+		CA265_RS13615	0.77	+1.2
3,403,551	+		CA265_RS13615	0.77	-0.5
3,403,670	+		CA265_RS13615	0.87	-2.0
3,403,670	+		CA265_RS13615	0.87	+0.7
3,403,693	+		CA265_RS13615	0.89	+0.3
3,403,694	-		CA265_RS13615	0.89	-2.9
3,403,695	+		CA265_RS13615	0.89	-0.9
3,403,695	+		CA265_RS13615	0.89	+0.8
3,403,696	-		CA265_RS13615	0.89	+0.9
3,403,696	-		CA265_RS13615	0.89	-0.0
3,403,708	+				-0.6
3,403,709	-				-0.0
3,403,712	+				-0.7
3,403,712	+				-0.9
3,403,729	-				-0.4
3,403,793	+				-0.1
3,403,822	+				+0.5
3,403,822	+				+0.2
3,403,823	-				-0.5
3,403,842	+				-1.1
3,403,877	-				+0.1
3,403,877	-				-0.3
3,404,191	+		CA265_RS13620	0.49	+0.5
3,404,200	+		CA265_RS13620	0.51	+0.5
3,404,230	+		CA265_RS13620	0.56	+0.8
3,404,294	-		CA265_RS13620	0.67	+0.6
3,404,387	-		CA265_RS13620	0.83	-0.6
3,404,389	+		CA265_RS13620	0.84	+0.6
3,404,389	+		CA265_RS13620	0.84	-0.5
3,404,389	+		CA265_RS13620	0.84	-0.1
3,404,488	+				+0.1
3,404,489	-				-0.8
3,404,499	-				-0.2
3,404,544	-				-0.3
3,404,561	-				-1.5
3,404,654	-				-0.2
3,404,660	-				-1.3
3,404,719	+				-0.5