Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13600

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
3,396,100	-		CA265_RS13595	0.25	+0.1
3,396,100	-		CA265_RS13595	0.25	+0.0
3,396,184	+		CA265_RS13595	0.32	+0.5
3,396,189	+		CA265_RS13595	0.32	-0.3
3,396,263	+		CA265_RS13595	0.38	-1.3
3,396,263	+		CA265_RS13595	0.38	-0.4
3,396,263	+		CA265_RS13595	0.38	-0.3
3,396,264	-		CA265_RS13595	0.38	-0.2
3,396,289	+		CA265_RS13595	0.40	+0.6
3,396,324	-		CA265_RS13595	0.43	-0.9
3,396,351	+		CA265_RS13595	0.45	-1.3
3,396,352	-		CA265_RS13595	0.45	-0.9
3,396,361	+		CA265_RS13595	0.46	-1.6
3,396,361	+		CA265_RS13595	0.46	-0.2
3,396,364	-		CA265_RS13595	0.46	+0.9
3,396,417	-		CA265_RS13595	0.50	-0.4
3,396,429	+		CA265_RS13595	0.51	-0.5
3,396,469	+		CA265_RS13595	0.54	+0.9
3,396,469	+		CA265_RS13595	0.54	-0.7
3,396,469	+		CA265_RS13595	0.54	+1.5
3,396,471	+		CA265_RS13595	0.55	-0.5
3,396,475	+		CA265_RS13595	0.55	+0.7
3,396,476	-		CA265_RS13595	0.55	-0.1
3,396,476	-		CA265_RS13595	0.55	-0.3
3,396,503	-		CA265_RS13595	0.57	+0.6
3,396,579	+		CA265_RS13595	0.63	-0.5
3,396,579	+		CA265_RS13595	0.63	+0.6
3,396,593	+		CA265_RS13595	0.64	-0.1
3,396,785	-		CA265_RS13595	0.80	+1.5
3,396,791	+		CA265_RS13595	0.80	+0.9
3,396,877	+		CA265_RS13595	0.87	+0.7
3,396,989	+				-1.2
3,396,990	-				+0.7
3,396,990	-				-0.8
3,397,050	+				-0.1
3,397,057	-				-0.1
3,397,109	+				+0.9
3,397,112	+				-0.4
3,397,113	-				+0.7
3,397,161	+				-1.1
3,397,161	+				-0.7
3,397,190	-				-0.3
3,397,210	-				+0.9
3,397,214	-				-0.2
3,397,233	+				+0.6
3,397,285	+				-0.1
3,397,286	-				-0.5
3,397,286	-				-0.2
3,397,350	+		CA265_RS13600	0.10	+0.0
3,397,352	+		CA265_RS13600	0.10	-0.7
3,397,353	-		CA265_RS13600	0.10	-0.0
3,397,353	-		CA265_RS13600	0.10	-2.3
3,397,462	-		CA265_RS13600	0.14	-1.3
3,397,473	+		CA265_RS13600	0.15	+1.4
3,397,482	+		CA265_RS13600	0.15	+1.4
3,397,494	+		CA265_RS13600	0.15	-0.5
3,397,495	-		CA265_RS13600	0.15	-0.2
3,397,539	+		CA265_RS13600	0.17	-0.6
3,397,540	-		CA265_RS13600	0.17	+1.9
3,397,542	-		CA265_RS13600	0.17	-0.6
3,397,542	-		CA265_RS13600	0.17	-0.1
3,397,542	-		CA265_RS13600	0.17	-1.2
3,397,542	-		CA265_RS13600	0.17	-2.3
3,397,571	+		CA265_RS13600	0.18	-3.4
3,397,580	+		CA265_RS13600	0.19	-0.3
3,397,581	-		CA265_RS13600	0.19	-1.7
3,397,599	-		CA265_RS13600	0.19	-0.2
3,397,672	-		CA265_RS13600	0.22	-0.8
3,397,718	-		CA265_RS13600	0.23	-1.1
3,397,765	-		CA265_RS13600	0.25	+0.3
3,397,795	-		CA265_RS13600	0.26	-0.4
3,397,903	+		CA265_RS13600	0.30	+1.6
3,397,904	-		CA265_RS13600	0.30	-0.9
3,397,904	-		CA265_RS13600	0.30	-0.1
3,397,962	+		CA265_RS13600	0.32	+0.7
3,397,993	-		CA265_RS13600	0.33	+0.4
3,398,007	+		CA265_RS13600	0.34	-0.7
3,398,008	-		CA265_RS13600	0.34	-0.4
3,398,052	+		CA265_RS13600	0.35	+0.0
3,398,059	-		CA265_RS13600	0.36	+0.1
3,398,064	+		CA265_RS13600	0.36	+0.3
3,398,065	-		CA265_RS13600	0.36	+0.1
3,398,104	+		CA265_RS13600	0.37	-1.2
3,398,160	-		CA265_RS13600	0.39	-0.3
3,398,255	+		CA265_RS13600	0.43	-0.2
3,398,258	-		CA265_RS13600	0.43	+0.7
3,398,274	+		CA265_RS13600	0.43	-0.5
3,398,321	+		CA265_RS13600	0.45	+0.1
3,398,377	-		CA265_RS13600	0.47	+0.3
3,398,416	+		CA265_RS13600	0.49	+0.1
3,398,488	+		CA265_RS13600	0.51	-0.2
3,398,536	-		CA265_RS13600	0.53	+0.9
3,398,621	+		CA265_RS13600	0.56	+0.5
3,398,621	+		CA265_RS13600	0.56	+0.5
3,398,622	-		CA265_RS13600	0.56	-0.8
3,398,676	+		CA265_RS13600	0.58	+0.0
3,398,678	+				+3.8
3,398,701	-		CA265_RS13600	0.59	+0.7
3,398,804	-		CA265_RS13600	0.63	+0.2
3,398,819	+		CA265_RS13600	0.63	-0.1
3,398,848	-		CA265_RS13600	0.64	-0.5
3,398,848	-		CA265_RS13600	0.64	-1.0
3,398,901	+		CA265_RS13600	0.66	-0.3
3,398,901	+		CA265_RS13600	0.66	+0.2
3,399,026	+		CA265_RS13600	0.71	+1.0
3,399,048	-		CA265_RS13600	0.71	-1.0
3,399,141	+		CA265_RS13600	0.75	+0.9
3,399,142	-		CA265_RS13600	0.75	-0.0
3,399,195	-		CA265_RS13600	0.77	-0.8
3,399,295	-		CA265_RS13600	0.80	-1.0
3,399,297	-		CA265_RS13600	0.80	-0.2
3,399,297	-		CA265_RS13600	0.80	-0.1
3,399,325	+		CA265_RS13600	0.81	+0.3
3,399,332	+		CA265_RS13600	0.82	-0.6
3,399,333	-		CA265_RS13600	0.82	+0.2
3,399,333	-		CA265_RS13600	0.82	-0.1
3,399,351	+		CA265_RS13600	0.82	-0.5
3,399,364	-		CA265_RS13600	0.83	+0.2
3,399,493	-		CA265_RS13600	0.87	-0.4
3,399,513	+		CA265_RS13600	0.88	-0.3
3,399,618	+				-1.0
3,399,618	+				-0.6
3,399,619	-				+0.3
3,399,628	+				-1.1
3,399,655	+				-2.1
3,399,656	-				-0.4
3,399,886	+				+1.4
3,399,886	+				+0.2
3,399,888	+				+0.3
3,399,888	+				-0.4
3,399,888	+				+0.8
3,400,028	+				+0.1
3,400,029	-				-0.0
3,400,053	+				-0.1
3,400,087	-				+2.2
3,400,109	+				+0.3
3,400,250	+				-0.1
3,400,429	+		CA265_RS13605	0.20	+0.6
3,400,452	-		CA265_RS13605	0.22	+0.8
3,400,463	-		CA265_RS13605	0.22	-0.3
3,400,505	-		CA265_RS13605	0.25	-0.4
3,400,515	-		CA265_RS13605	0.25	+0.1
3,400,595	-		CA265_RS13605	0.30	+0.1
3,400,595	-		CA265_RS13605	0.30	-0.8
3,400,604	+		CA265_RS13605	0.31	-0.7
3,400,688	+		CA265_RS13605	0.36	+0.5
3,400,754	-		CA265_RS13605	0.40	-1.0
3,400,756	+		CA265_RS13605	0.40	-0.3
3,400,780	+		CA265_RS13605	0.42	-0.6
3,400,843	+		CA265_RS13605	0.46	+1.4