Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13040

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
3,245,588	+				+0.8
3,245,667	-				+0.2
3,245,734	+		CA265_RS13040	0.12	-0.5
3,245,734	+		CA265_RS13040	0.12	-0.3
3,245,735	-		CA265_RS13040	0.12	+0.7
3,245,801	+		CA265_RS13040	0.20	-0.6
3,245,802	-		CA265_RS13040	0.20	+1.5
3,245,802	-		CA265_RS13040	0.20	+1.6
3,245,914	+		CA265_RS13040	0.33	+0.1
3,245,915	-		CA265_RS13040	0.33	+0.2
3,245,936	-		CA265_RS13040	0.35	+0.9
3,246,004	+		CA265_RS13040	0.43	+0.5
3,246,024	+		CA265_RS13040	0.45	-1.0
3,246,024	+		CA265_RS13040	0.45	-0.1
3,246,025	-		CA265_RS13040	0.45	+0.5
3,246,025	-		CA265_RS13040	0.45	+0.9
3,246,025	-		CA265_RS13040	0.45	+2.6
3,246,025	-		CA265_RS13040	0.45	+0.9
3,246,025	-		CA265_RS13040	0.45	+0.5
3,246,054	-		CA265_RS13040	0.48	+0.8
3,246,169	+		CA265_RS13040	0.62	+0.2
3,246,202	+		CA265_RS13040	0.65	+0.1
3,246,203	-		CA265_RS13040	0.65	-0.1
3,246,205	-		CA265_RS13040	0.66	+0.0
3,246,205	-		CA265_RS13040	0.66	+0.4
3,246,316	+		CA265_RS13040	0.78	+0.2
3,246,317	-				+0.6
3,246,338	+		CA265_RS13040	0.81	-0.4
3,246,349	+		CA265_RS13040	0.82	-0.4
3,246,350	-		CA265_RS13040	0.82	+1.1
3,246,354	-		CA265_RS13040	0.83	-0.6
3,246,432	+				-0.4
3,246,504	+				-0.9
3,246,508	+				-1.2
3,246,561	-				-1.2
3,246,561	-				-0.2
3,246,566	+				+1.4
3,246,599	-				+0.9
3,246,628	-				-0.2
3,246,663	-				-0.0
3,246,663	-				+0.2
3,246,755	+				-0.9
3,246,780	-				-1.4
3,246,799	+				-0.6
3,246,799	+				-0.3
3,246,800	-				+0.1
3,246,923	+				-1.3
3,246,923	+				-0.6
3,246,947	-				+1.6
3,246,947	-				-0.3
3,246,954	+				-0.6
3,247,045	+				-1.0
3,247,047	+				+1.6
3,247,047	+				-3.0
3,247,047	+				-0.9
3,247,048	-				-0.7
3,247,126	+				-0.3
3,247,203	-				-0.0
3,247,205	+				-0.7
3,247,261	-				-1.3
3,247,286	+				-0.8
3,247,286	+				-2.1
3,247,387	+				-1.5