Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11300

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
2,798,662	-		CA265_RS11295	0.42	-0.9
2,798,849	-		CA265_RS11295	0.68	+0.9
2,798,857	+		CA265_RS11295	0.69	+0.6
2,798,868	+		CA265_RS11295	0.70	+1.1
2,798,869	-		CA265_RS11295	0.71	-0.9
2,798,869	-		CA265_RS11295	0.71	-1.2
2,798,871	-		CA265_RS11295	0.71	+0.6
2,798,922	+		CA265_RS11295	0.78	-0.3
2,798,931	+		CA265_RS11295	0.79	-1.7
2,798,956	-		CA265_RS11295	0.83	+0.8
2,798,956	-		CA265_RS11295	0.83	-0.8
2,799,097	-				-0.3
2,799,142	+				+0.3
2,799,144	+				-0.2
2,799,145	-				-0.5
2,799,145	-				-1.4
2,799,149	+				-0.4
2,799,149	+				+1.1
2,799,150	-				+0.0
2,799,150	-				-0.6
2,799,150	-				+0.2
2,799,155	+				+1.1
2,799,166	+				+1.5
2,799,203	-				-1.8
2,799,345	+				+0.4
2,799,345	+				+0.9
2,799,345	+				+0.4
2,799,346	-				-0.7
2,799,354	+				-1.6
2,799,355	-				-1.0
2,799,486	-				-0.5
2,799,516	-				-2.0
2,799,602	-				-0.1
2,799,712	-		CA265_RS11300	0.12	-0.0
2,799,756	-		CA265_RS11300	0.17	-0.1
2,799,775	+		CA265_RS11300	0.19	+0.0
2,799,775	+		CA265_RS11300	0.19	+0.5
2,799,807	+		CA265_RS11300	0.23	+0.2
2,799,817	+		CA265_RS11300	0.24	-0.8
2,799,817	+		CA265_RS11300	0.24	+0.1
2,799,818	-		CA265_RS11300	0.24	+1.1
2,799,825	+		CA265_RS11300	0.24	-1.0
2,799,826	-		CA265_RS11300	0.25	-1.1
2,799,829	-		CA265_RS11300	0.25	+0.5
2,799,879	-		CA265_RS11300	0.30	+0.2
2,799,912	-		CA265_RS11300	0.34	+0.3
2,799,912	-		CA265_RS11300	0.34	+0.4
2,799,949	-		CA265_RS11300	0.38	+0.5
2,799,986	+		CA265_RS11300	0.42	+1.4
2,800,039	+		CA265_RS11300	0.47	-0.2
2,800,040	-		CA265_RS11300	0.47	-0.0
2,800,048	-		CA265_RS11300	0.48	-1.7
2,800,093	-		CA265_RS11300	0.53	-0.3
2,800,117	+		CA265_RS11300	0.55	-0.8
2,800,153	-		CA265_RS11300	0.59	-0.5
2,800,153	-		CA265_RS11300	0.59	-0.1
2,800,173	-		CA265_RS11300	0.61	+0.3
2,800,216	+		CA265_RS11300	0.66	+0.5
2,800,216	+		CA265_RS11300	0.66	+0.3
2,800,224	+		CA265_RS11300	0.67	+0.4
2,800,226	+		CA265_RS11300	0.67	-0.1
2,800,279	+		CA265_RS11300	0.73	+0.1
2,800,334	-		CA265_RS11300	0.78	+1.7
2,800,334	-		CA265_RS11300	0.78	+1.3
2,800,335	+		CA265_RS11300	0.79	-0.2
2,800,378	-		CA265_RS11300	0.83	-0.7
2,800,378	-		CA265_RS11300	0.83	+0.8
2,800,477	+				-1.1
2,800,523	+				+0.4
2,800,562	+				-0.2
2,800,563	-				+0.9
2,800,632	+				+0.5
2,800,633	-				+0.3
2,800,668	-				+0.2
2,800,669	+				-0.2
2,800,670	-				+0.7
2,800,722	-				+0.8
2,800,739	+				-0.8
2,800,749	+				-0.6
2,800,758	+				+0.3
2,800,758	+				-0.3
2,800,759	-				+0.3
2,800,862	-				-0.0
2,800,910	-				+0.4
2,801,014	+		CA265_RS11305	0.11	+0.5
2,801,034	+		CA265_RS11305	0.12	+0.4
2,801,132	-		CA265_RS11305	0.20	-0.4
2,801,142	+		CA265_RS11305	0.21	+1.2
2,801,143	-		CA265_RS11305	0.21	+2.6
2,801,207	+		CA265_RS11305	0.27	+0.9
2,801,243	+		CA265_RS11305	0.30	+0.0
2,801,250	+		CA265_RS11305	0.30	-1.1
2,801,260	-		CA265_RS11305	0.31	+0.1
2,801,264	+		CA265_RS11305	0.31	-0.5
2,801,265	-		CA265_RS11305	0.31	+0.1
2,801,354	-		CA265_RS11305	0.39	-0.2
2,801,412	-		CA265_RS11305	0.44	-0.5
2,801,431	+		CA265_RS11305	0.45	-0.6
2,801,433	+		CA265_RS11305	0.45	+0.4
2,801,536	-		CA265_RS11305	0.54	+0.1