Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06530

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
1,610,600	-		CA265_RS06520	0.72	+1.2
1,610,622	+		CA265_RS06520	0.76	+0.5
1,610,737	+				+0.3
1,610,844	-		CA265_RS06525	0.15	+0.5
1,610,861	+		CA265_RS06525	0.18	-0.2
1,610,889	+		CA265_RS06525	0.23	-0.4
1,610,890	-		CA265_RS06525	0.24	+0.5
1,610,890	-		CA265_RS06525	0.24	+1.1
1,610,890	-		CA265_RS06525	0.24	+0.1
1,610,890	-		CA265_RS06525	0.24	-2.0
1,610,930	-		CA265_RS06525	0.31	+1.6
1,611,168	+		CA265_RS06525	0.74	+0.8
1,611,168	+		CA265_RS06525	0.74	+0.3
1,611,265	+				+0.8
1,611,323	+				-0.5
1,611,358	+				+1.1
1,611,380	+				-1.0
1,611,408	-				-0.2
1,611,419	-				+0.7
1,611,423	-				-0.3
1,611,431	+				+0.7
1,611,435	+				-0.1
1,611,436	-				-0.6
1,611,437	+				+0.4
1,611,437	+				+0.4
1,611,438	-				-1.2
1,611,441	+				+0.3
1,611,442	-				-0.5
1,611,444	-				+0.6
1,611,490	+				+0.2
1,611,655	+				+0.3
1,611,736	+		CA265_RS06530	0.13	-0.1
1,611,767	+		CA265_RS06530	0.16	+0.2
1,611,797	+		CA265_RS06530	0.18	+0.3
1,611,798	-		CA265_RS06530	0.18	-0.0
1,611,927	-		CA265_RS06530	0.28	+1.1
1,611,949	+		CA265_RS06530	0.30	+2.0
1,611,950	-		CA265_RS06530	0.30	+0.3
1,611,966	-		CA265_RS06530	0.31	+0.8
1,611,968	+		CA265_RS06530	0.31	-0.1
1,611,969	-		CA265_RS06530	0.31	-0.8
1,611,969	-		CA265_RS06530	0.31	+1.1
1,612,013	-		CA265_RS06530	0.35	+1.6
1,612,020	-		CA265_RS06530	0.35	+0.6
1,612,038	-		CA265_RS06530	0.37	+1.2
1,612,067	+		CA265_RS06530	0.39	-0.1
1,612,068	-		CA265_RS06530	0.39	-0.7
1,612,227	-		CA265_RS06530	0.51	+0.3
1,612,227	-		CA265_RS06530	0.51	+0.8
1,612,227	-		CA265_RS06530	0.51	+1.3
1,612,296	-		CA265_RS06530	0.56	-0.6
1,612,308	+		CA265_RS06530	0.57	-0.8
1,612,308	+		CA265_RS06530	0.57	-0.2
1,612,310	+		CA265_RS06530	0.57	-0.0
1,612,311	-		CA265_RS06530	0.57	+0.1
1,612,389	-		CA265_RS06530	0.63	+1.8
1,612,447	+		CA265_RS06530	0.68	+0.8
1,612,448	-		CA265_RS06530	0.68	+0.8
1,612,450	-		CA265_RS06530	0.68	-1.1
1,612,451	+		CA265_RS06530	0.68	-2.0
1,612,535	-		CA265_RS06530	0.75	-1.4
1,612,646	+		CA265_RS06530	0.83	-0.6
1,612,657	+		CA265_RS06530	0.84	+0.3
1,612,685	+		CA265_RS06530	0.86	+1.0
1,612,733	+		CA265_RS06530	0.90	+1.7
1,612,757	+				+0.4
1,612,758	-				+0.8
1,612,767	+				-0.2
1,612,768	-				+0.3
1,612,809	+				+0.8
1,612,837	-				+0.9
1,612,869	-				+0.8
1,612,892	+				-0.2
1,612,892	+				-0.6
1,612,920	-				+0.4
1,612,928	+				+0.1
1,613,002	+				+0.3
1,613,062	-				+0.1
1,613,062	-				-1.4
1,613,072	-				-0.1
1,613,156	+				+0.1
1,613,157	-				+0.3
1,613,168	+				+0.4
1,613,169	-				+0.5
1,613,169	-				+0.8
1,613,170	+				-0.6
1,613,195	-				+0.4
1,613,200	-				-0.0
1,613,207	+				-0.2
1,613,292	+				+0.2
1,613,294	+				-0.2
1,613,301	+				-0.2
1,613,366	+				+1.6
1,613,374	-		CA265_RS06535	0.16	-0.4
1,613,394	-		CA265_RS06535	0.19	-0.0
1,613,455	+		CA265_RS06535	0.25	-1.1
1,613,529	+		CA265_RS06535	0.32	-0.4
1,613,593	+		CA265_RS06535	0.39	-1.9
1,613,593	+		CA265_RS06535	0.39	-0.1
1,613,593	+		CA265_RS06535	0.39	-1.0
1,613,654	-		CA265_RS06535	0.45	-0.5
1,613,803	-		CA265_RS06535	0.61	+0.9