Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05830

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
1,433,122	+		CA265_RS05825	0.86	-1.2
1,433,200	+		CA265_RS05825	0.87	-0.2
1,433,201	-		CA265_RS05825	0.87	+0.4
1,433,218	+		CA265_RS05825	0.87	-0.2
1,433,223	+		CA265_RS05825	0.87	+0.3
1,433,254	+		CA265_RS05825	0.87	-0.4
1,433,255	-		CA265_RS05825	0.88	-0.9
1,433,289	+		CA265_RS05825	0.88	-1.3
1,433,306	-		CA265_RS05825	0.88	-0.6
1,433,310	-		CA265_RS05825	0.88	-1.4
1,433,312	-		CA265_RS05825	0.88	-1.2
1,433,333	+		CA265_RS05825	0.89	-0.3
1,433,334	-		CA265_RS05825	0.89	-1.0
1,433,341	+		CA265_RS05825	0.89	+0.5
1,433,346	+		CA265_RS05825	0.89	+0.1
1,433,346	+		CA265_RS05825	0.89	+0.3
1,433,347	-		CA265_RS05825	0.89	-1.9
1,433,386	-		CA265_RS05825	0.89	+0.1
1,433,398	-		CA265_RS05825	0.90	-1.3
1,433,435	-				+1.5
1,433,501	+				-0.5
1,433,515	-				-0.1
1,433,563	+				+0.1
1,433,588	+				-0.7
1,433,589	-				-0.9
1,433,590	+				-1.3
1,433,676	-				+0.8
1,433,687	-				+0.1
1,433,706	+				-0.0
1,433,731	+				+0.2
1,433,739	-				-0.4
1,433,770	+				-0.9
1,433,771	-				+1.4
1,433,779	+				-0.4
1,433,834	-				+1.0
1,433,852	+				+0.7
1,433,922	+				-0.8
1,433,991	-				+3.1
1,433,992	+				-0.8
1,433,992	+				-0.2
1,434,011	-				-0.1
1,434,047	-				-0.7
1,434,060	-				+0.6
1,434,125	-				+2.5
1,434,125	-				+0.6
1,434,137	+				-0.8
1,434,138	-				+0.6
1,434,215	+		CA265_RS05830	0.15	-0.1
1,434,216	-		CA265_RS05830	0.15	+0.1
1,434,219	+		CA265_RS05830	0.15	-1.7
1,434,219	+		CA265_RS05830	0.15	-0.4
1,434,242	+		CA265_RS05830	0.18	+1.2
1,434,246	+		CA265_RS05830	0.19	-0.3
1,434,246	+		CA265_RS05830	0.19	-0.1
1,434,246	+		CA265_RS05830	0.19	+0.1
1,434,246	+		CA265_RS05830	0.19	-0.3
1,434,258	+		CA265_RS05830	0.21	-1.3
1,434,261	+		CA265_RS05830	0.21	-0.9
1,434,262	-		CA265_RS05830	0.21	-0.6
1,434,280	-		CA265_RS05830	0.24	+0.3
1,434,311	-		CA265_RS05830	0.29	+0.5
1,434,318	+		CA265_RS05830	0.30	-0.1
1,434,319	-		CA265_RS05830	0.30	+0.7
1,434,319	-		CA265_RS05830	0.30	-2.1
1,434,360	+		CA265_RS05830	0.36	-1.0
1,434,360	+		CA265_RS05830	0.36	-0.4
1,434,361	-		CA265_RS05830	0.36	+0.4
1,434,364	-		CA265_RS05830	0.36	-0.1
1,434,364	-		CA265_RS05830	0.36	-0.7
1,434,364	-		CA265_RS05830	0.36	-0.8
1,434,369	-		CA265_RS05830	0.37	+1.4
1,434,504	+		CA265_RS05830	0.57	-0.7
1,434,504	+		CA265_RS05830	0.57	-0.9
1,434,507	+		CA265_RS05830	0.57	+0.1
1,434,507	+		CA265_RS05830	0.57	-3.1
1,434,507	+		CA265_RS05830	0.57	-1.2
1,434,507	+		CA265_RS05830	0.57	-0.9
1,434,508	-		CA265_RS05830	0.57	+0.4
1,434,509	+		CA265_RS05830	0.57	+0.1
1,434,584	+		CA265_RS05830	0.68	-0.7
1,434,585	-		CA265_RS05830	0.68	+0.1
1,434,634	+		CA265_RS05830	0.76	-0.7
1,434,799	+				-0.0
1,434,804	+				+0.3
1,434,821	+				-0.1
1,434,821	+				-0.9
1,434,859	-				+0.4
1,434,867	-				-0.0
1,434,868	+				-1.3
1,434,871	+				+1.0
1,434,872	-				+0.1
1,434,874	+				-0.4
1,434,876	+				+1.3
1,434,885	-				+0.0
1,434,905	-				+0.4
1,434,973	+				-0.4
1,434,973	+				-0.6
1,435,011	-				-0.2
1,435,038	-				+0.9
1,435,075	-				+1.6
1,435,097	-				-0.4
1,435,100	+				+2.1
1,435,100	+				-0.3
1,435,169	-		CA265_RS05835	0.21	-0.6
1,435,169	-		CA265_RS05835	0.21	-0.2
1,435,207	-		CA265_RS05835	0.29	+0.7
1,435,249	+		CA265_RS05835	0.39	+0.4
1,435,250	-		CA265_RS05835	0.39	+0.4
1,435,254	-		CA265_RS05835	0.40	+0.7
1,435,254	-		CA265_RS05835	0.40	+0.3
1,435,418	+		CA265_RS05835	0.77	+0.1
1,435,502	+				+0.0
1,435,557	+				-2.0
1,435,558	-				+0.5
1,435,663	-		CA265_RS05840	0.21	-0.2
1,435,795	-		CA265_RS05840	0.51	-0.0