Experiment: R2A with Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02445 and CA265_RS02450 are separated by 81 nucleotides CA265_RS02450 and CA265_RS02455 are separated by 80 nucleotides
CA265_RS02445: CA265_RS02445 - peptidase C69, at 604,093 to 605,433
_RS02445
CA265_RS02450: CA265_RS02450 - hypothetical protein, at 605,515 to 606,303
_RS02450
CA265_RS02455: CA265_RS02455 - Fe-S oxidoreductase, at 606,384 to 607,679
_RS02455
Position (kb) 605
606
607 Strain fitness (log2 ratio) -1
0
1 at 604.516 kb on - strand, within CA265_RS02445 at 604.583 kb on + strand, within CA265_RS02445 at 604.584 kb on - strand, within CA265_RS02445 at 604.597 kb on - strand, within CA265_RS02445 at 604.597 kb on - strand, within CA265_RS02445 at 604.597 kb on - strand, within CA265_RS02445 at 604.618 kb on - strand, within CA265_RS02445 at 604.684 kb on - strand, within CA265_RS02445 at 604.714 kb on - strand, within CA265_RS02445 at 604.714 kb on - strand, within CA265_RS02445 at 604.714 kb on - strand, within CA265_RS02445 at 604.715 kb on + strand, within CA265_RS02445 at 604.715 kb on + strand, within CA265_RS02445 at 604.715 kb on + strand, within CA265_RS02445 at 604.773 kb on + strand, within CA265_RS02445 at 604.774 kb on - strand, within CA265_RS02445 at 604.780 kb on - strand, within CA265_RS02445 at 604.785 kb on - strand, within CA265_RS02445 at 604.966 kb on - strand, within CA265_RS02445 at 604.966 kb on - strand, within CA265_RS02445 at 605.021 kb on + strand, within CA265_RS02445 at 605.156 kb on + strand, within CA265_RS02445 at 605.156 kb on + strand, within CA265_RS02445 at 605.157 kb on - strand, within CA265_RS02445 at 605.157 kb on - strand, within CA265_RS02445 at 605.177 kb on - strand, within CA265_RS02445 at 605.190 kb on - strand, within CA265_RS02445 at 605.190 kb on - strand, within CA265_RS02445 at 605.259 kb on + strand, within CA265_RS02445 at 605.260 kb on - strand, within CA265_RS02445 at 605.302 kb on - strand at 605.348 kb on + strand at 605.372 kb on - strand at 605.442 kb on + strand at 605.454 kb on + strand at 605.455 kb on - strand at 606.310 kb on - strand at 606.317 kb on - strand at 606.330 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Sisomicin 0.008 mg/ml remove 604,516 - CA265_RS02445 0.32 -0.1 604,583 + CA265_RS02445 0.37 -0.9 604,584 - CA265_RS02445 0.37 -0.0 604,597 - CA265_RS02445 0.38 +0.2 604,597 - CA265_RS02445 0.38 -0.5 604,597 - CA265_RS02445 0.38 -0.7 604,618 - CA265_RS02445 0.39 -0.8 604,684 - CA265_RS02445 0.44 -1.2 604,714 - CA265_RS02445 0.46 -0.4 604,714 - CA265_RS02445 0.46 -0.1 604,714 - CA265_RS02445 0.46 -0.7 604,715 + CA265_RS02445 0.46 +0.4 604,715 + CA265_RS02445 0.46 +0.2 604,715 + CA265_RS02445 0.46 +0.0 604,773 + CA265_RS02445 0.51 -1.5 604,774 - CA265_RS02445 0.51 +0.0 604,780 - CA265_RS02445 0.51 +1.4 604,785 - CA265_RS02445 0.52 -0.1 604,966 - CA265_RS02445 0.65 +0.9 604,966 - CA265_RS02445 0.65 -0.8 605,021 + CA265_RS02445 0.69 -0.5 605,156 + CA265_RS02445 0.79 +0.2 605,156 + CA265_RS02445 0.79 -0.7 605,157 - CA265_RS02445 0.79 -0.0 605,157 - CA265_RS02445 0.79 -0.3 605,177 - CA265_RS02445 0.81 -0.1 605,190 - CA265_RS02445 0.82 -0.6 605,190 - CA265_RS02445 0.82 -0.4 605,259 + CA265_RS02445 0.87 -1.0 605,260 - CA265_RS02445 0.87 -0.3 605,302 - -0.2 605,348 + +0.5 605,372 - -0.1 605,442 + -0.9 605,454 + +0.3 605,455 - +0.4 606,310 - -0.6 606,317 - +1.0 606,330 - -1.4
Or see this region's nucleotide sequence