Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS02185
Experiment: R2A with Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Sisomicin 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
552,355 | + | +0.9 | |||
552,374 | - | -0.8 | |||
552,380 | + | -0.5 | |||
552,389 | - | -0.3 | |||
552,431 | - | -1.4 | |||
552,452 | - | -0.3 | |||
552,455 | - | +0.0 | |||
552,455 | - | -0.2 | |||
552,515 | - | +0.1 | |||
552,562 | + | +0.2 | |||
552,599 | - | -1.9 | |||
552,618 | - | +0.5 | |||
552,655 | + | +0.7 | |||
552,657 | + | +0.7 | |||
552,671 | - | +0.1 | |||
552,692 | - | +0.1 | |||
552,809 | + | -0.0 | |||
552,841 | - | +0.5 | |||
552,918 | - | +0.8 | |||
553,291 | + | -2.2 | |||
553,313 | - | +0.3 | |||
553,316 | - | +0.2 | |||
553,316 | - | -1.2 | |||
554,362 | - | -1.9 | |||
554,367 | - | +1.0 | |||
554,486 | - | CA265_RS02190 | 0.15 | -0.3 | |
554,650 | - | CA265_RS02190 | 0.35 | -0.8 | |
554,835 | - | +0.4 | |||
554,927 | - | CA265_RS02190 | 0.68 | -0.4 | |
555,118 | - | -0.6 | |||
555,121 | - | +0.2 | |||
555,202 | - | +0.8 | |||
555,202 | - | -1.7 |
Or see this region's nucleotide sequence